Hirundo rustica (Barn swallow): 120751650
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Entry
120751650 CDS
T09369
Symbol
MKRN1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120751650 (MKRN1)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120751650 (MKRN1)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120751650 (MKRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-RING_UBOX
zf-C3HC4
zf-CCCH_3
zf-RING_2
zf-RING_5
zf-rbx1
zf-ANAPC11
zf-C3HC4_4
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
120751650
NCBI-ProteinID:
XP_039917737
LinkDB
All DBs
Position
4:complement(64233487..64254298)
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AA seq
523 aa
AA seq
DB search
MAEAVAALETTAGAAGAALGSPAAAAGAAAVAFDFAAVPPPSAGPGGGGWTKQVTCRYFM
HGVCKEGDNCRYSHDLSTSQSAMVCRYYQRGCCAYGDHCRYEHTKPLIQEEEADVNPEAE
IYPSVSSEFASLPETVEEFIAEIEDENTDLAAAGVGAEDWVNAVEFVPGQPYCGRGPLQV
LEGCSKVTPEPSLLQAEQPELSEPFLIGEVFHPSNHLHGPQLAAPFCAEAPLQEMVIEEE
YEKQQADVEMKKELCPYAALGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSC
IEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCSHTYCLKCIRKWRS
AKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKEAMSNKPCRYFDEGRGS
CPFGGNCFYKHEYPDGRQEEPQRPKVGTSSRYRAQRRNRFWEFIEERENGDPFETDEDEV
VTFELGEMLLMLLAAGGDDELTDSEDEWDLFHDELEDYYDLDL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggtggcggcgctggagacaacggcgggcgcggcgggcgcggccctgggg
tcgcccgcggcggccgcgggagcggcggcggtcgctttcgacttcgcggccgtgccgccg
ccctccgcggggccggggggaggcggctggaccaagcaggtcacctgcagatacttcatg
catggagtctgcaaggaaggagacaactgccgctactcccatgacctctccaccagtcag
tctgccatggtgtgcaggtattaccagcgaggatgctgtgcttatggagatcattgcaga
tatgaacataccaagccactaatacaggaagaagaggctgatgtgaatccagaggcagaa
atctatccatcagtgtcctcagagttcgcatcgctccctgaaacagttgaagaatttatt
gctgagatagaagatgaaaatacagatctggcagcagcaggagtaggggctgaagactgg
gtgaatgcagtggagtttgtccctgggcagccatactgtggacgtggccccctccaggtc
ctggaaggctgcagtaaggtcaccccggagccttctcttctccaggccgaacaacccgag
ctctctgagcctttcctcataggggaggtgttccatccctctaaccatcttcatggccct
caactagctgcccctttctgtgctgaagcacccttgcaggaaatggtgattgaagaagaa
tacgagaagcagcaggcagatgtggagatgaagaaggagctgtgcccctacgctgcatta
ggagaatgtcgttatggagagaactgcgtgtatatccatggggacgtgtgtgatatgtgt
ggcctgcaggtcttgcatcccattgatgctgcacagagatctcagcacataaagtcttgc
attgaagctcacgagaaggacatggagctttcctttgccgtccagcgtagcaaagacatg
gtgtgcgggatctgcatggaggtggtgtatgagaaagctaaccctagcgagcgccgcttc
gggatcctctccaactgcagccacacttactgtctcaagtgcatccgcaagtggaggagc
gctaaacaatttgagagcaagattataaagtcctgcccagaatgtcggatcacatctaac
tttgtcattccaagtgagtactgggtggaggagaaggaagagaagcagaaactcattcag
aaatacaaggaggcaatgagcaacaagccatgcaggtattttgatgaaggccgtgggagc
tgtccatttggagggaactgtttttacaagcatgaatatcctgatggccgccaagaggag
ccacaaagacccaaagtaggaacctcaagtagataccgggcccagcggaggaatcggttc
tgggagttcatcgaggagcgagagaatggtgatccctttgaaaccgacgaggatgaggtg
gtgacctttgagctcggtgagatgttgcttatgctgttggcagctggaggtgatgatgag
ctaacggattccgaggatgagtgggacttatttcatgatgagctggaagattattatgat
ttggatctatag
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