Hirundo rustica (Barn swallow): 120751693
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Entry
120751693 CDS
T09369
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120751693 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120751693 (YBX3)
03041 Spliceosome [BR:
hrt03041
]
120751693 (YBX3)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
120751693 (YBX3)
Spliceosome [BR:
hrt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120751693 (YBX3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Bim_N
Motif
Other DBs
NCBI-GeneID:
120751693
NCBI-ProteinID:
XP_039917882
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All DBs
Position
4:complement(60421175..60437630)
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AA seq
280 aa
AA seq
DB search
MSEAPETSTASPAPSAPPVPAAPPAPAAPDSAPKSAAAPGAAVAEAAPGAAAATATAAAE
SKKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETV
EFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYFGRRRGPPRSQGGEGEIKEG
VTEGGQLQQVHRNPTYRPRYRRGPPRPRPAPVTGEAENKENHHEANAMGQQPLRRGYRRP
YNYRRRPRPASAPAQEGKETKATETPAENPAPVTEQSGAE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgccggagaccagcaccgccagccccgcgccctccgcgccgcccgtcccg
gccgcgccgcccgcgcccgccgccccggactccgctcccaagagcgccgccgcgccgggt
gcggctgtcgccgaggcggcccccggcgccgccgccgcaaccgcaaccgcggcggccgag
tcgaagaagaaagtgctggccaccaaagttcttggcacagtcaagtggttcaatgtcaga
aatggctatggctttatcaacagaaatgataccaaagaagatgtgtttgttcatcagacg
gcaataaagaaaaacaatccacggaagtacctgcgcagtgttggcgatggagaaactgta
gaatttgatgtggtcgagggagagaagggtgcagaagcagcgaatgtcactggtccagac
ggagtccccgtggaaggcagccgctacgctgcagaccggcgccgctatcggcggggctac
tttggccgacgccggggcccacctcggagtcagggcggtgagggagaaatcaaggaaggg
gtcacagaaggaggacaacttcagcaagtgcacaggaatcctacctaccgtccccgctat
cgcagagggccccctcgcccgcgccccgccccggtgactggagaggctgagaacaaggag
aaccatcacgaggccaatgccatgggccagcagccgctgcgccgcggctacaggcgcccc
tacaactaccggcgccggccgcgcccggccagcgctccggcacaggagggcaaagagaca
aaggcaactgaaacacctgctgaaaatcctgctccagtgacagagcagagtggtgctgag
taa
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