Hirundo rustica (Barn swallow): 120751732
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Entry
120751732 CDS
T09369
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120751732 (TNRC6B)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120751732 (TNRC6B)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120751732 (TNRC6B)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120751732 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
120751732
NCBI-ProteinID:
XP_039917958
LinkDB
All DBs
Position
4:complement(52361974..52491341)
Genome browser
AA seq
1863 aa
AA seq
DB search
MQTDEGEILEEGSPKVSEMEHEDFVMEGHGKTPPPGEENKQEKEQEREEQLMEDKKRKKE
DKKKKDSAQKVTDQKTKVPEVTKPSLSQPVAASPIGNSPSPPVNGGNNAKRVAVPNGQPP
SAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPSPAAPGANPNNAQPVT
GALLQSDSGTATDSAIGGAAASNYANSTWASGASSNSSTNPTHIWDKVIVDGSDMEEWPC
IASKDAESSSENTTDNNSASNPGLEKSALPGSTTSNKGKGSQCQSGSAGNECNLGAWKSD
PKAKSVQSSNPATESNNGLSNWRNLSGQDRISPGSGFSNFNPNSNPSAWPALVQEGNSRK
GTLESDSGSSNAQISTVGQTSREQQSKMENAGVNFVSGREQAQIHNTDGPKNGNTNSLNL
SSPNPMENKGMPFEMGLGNPSRSTDTPSQSTGERKMGSVGSWGTARGSSETNTVSGQSNS
GNHGSNGKDREDSWKGASVQKPNRSRSDSWDNSNQSTGGGSWNFGPQHANESKWGEGNKL
TSGVSQGEWKHLSGSDELKIGEWSGPNQPNSSTGAWDNQKGHTLPENQGNSQAPCWGRSS
SSAGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTG
WGQTQIKQDTVWDIEEMPRPEGKSDKGTEGWESSATQTKNSGGWGDVPSQSNQNKSGWGE
LSTPAEWKDPKNTGGWNDYKNSSSSNWGGGRQEEKSSSSWNDSSSKDQGWGGRQTNQGWS
SGKNGWGEEVDQTKNSNWESTGNKPVSGWGEGGQNEIGTWGNGANTSSASKGGWDDCKRT
STWNETGRQPSSWNKQQQQHQQQQQESSGSWGPPPQTPSNGRPPNPNWNSGPQSAAPKEE
EPSGWEEPSPQSISRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQAPREQSLPTPMT
SKSQASVWSKSTPPAPDNGTSAWGEPNETSPGWGEVDDTGASTTGWGNAPSNAPNAMKSS
SKSMQDGWGESDGPVTGTRHSSWEEEEEGGVWNTAGSQGSSSSHNSTSWGQGGKKTQMKC
ALKGGNSDSWMNPLSKQFSNMGLLSQTDDIPGSKMDLSVGGLPDKKFEVDKRAMNLGDFN
DMMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQDGCLGDEAPCSPFSPSPSYKLSP
SGSTLSSVGLGAIGSGLSPQNFAARQGGNHGLFGNSTAQSRGMHTPVQPLNPSPNIRAQV
PPQFLSPQVSTSMLKQFPNSGLNPGLFNMGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQ
QQQQQLLQSQRKLSQAVRQQQEQQIARMVSALQQQQQRQPGMKHSPSHPVGPKPHLDSMV
PNPLNVGLSDLQSKGQIPGYGSGGFGSSGMDYGMVGGKEAGTESRFKQWTMMEGLSSVAS
QDANMHKNGAIVPPGKARGGSPYNQFDIIQGDPLSSHAGPAGDSWLPAKSPPTNKIGSKS
SNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNS
SLNTSLPSPGAWPYSASDNSFTNVHSTSAKFSDYKSAWSPDPIGHNPTHLSNKMWKNHIS
SRNTTGLPRPPPGLTNPKPSSPWNSTAPRSVRGWGAQDSRLGSASTWSDGGSVRPSYWLV
LHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYNTKQEAAKAQTALHMCVLGNT
TILAEFATDEEVSRFLAQAQPPTPAATPSAPAAGWQSLETGQNQTDPVGPALNLFGGSTG
LGQWSSGGGGGSSGGDLTGASLWGPPNYSSSLWGVPSVEDPHRMGSPAPLLPGDLLGGGS
DSI
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgatgagggagaaatactggaggaaggcagtcccaaggtcagtgagatggaa
catgaggattttgtaatggaggggcatggcaagactccacctcctggtgaagaaaacaaa
caagagaaggagcaagaaagggaagaacagttaatggaagacaagaaaaggaaaaaagag
gataagaaaaagaaggactctgctcagaaggtcacagatcaaaaaaccaaagtgcccgaa
gtgacgaaaccaagtttaagccaaccagtggctgccagcccaattggcaactctccatcg
ccaccagtcaatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgcca
agcgccgcccgctacatgcctcgggaggtgccaccgcgattccgttgccagcaggaccac
aaagtgttactgaaacgtgggcagccccctccgccatcctgcatgctccttgggggtgga
gcagggcctccctccccagcagcaccaggagcaaacccaaacaacgcacaaccagtgact
ggagcacttctgcagagtgacagtgggactgcaacagattcagcaattggaggtgctgct
gcttcaaattatgcaaattccacttgggcttctggagcctcctccaacagcagtaccaac
ccaactcacatctgggacaaggtgattgtagacgggtctgacatggaagagtggccttgt
attgccagcaaagatgctgagtcttcttccgagaacaccaccgataacaacagtgcctca
aaccctggcttggagaagagcgctctgccaggaagcaccactagtaacaaagggaaagga
agccagtgccagtctggaagcgctggaaatgaatgtaatcttggggcctggaaatctgat
cccaaggctaaatctgttcaatcttccaaccctgctaccgagagtaacaatggactaagt
aattggaggaacttgagtggacaagacagaatcagtcccggttctggcttcagcaacttt
aacccaaatagcaacccatctgcttggccagcactggttcaagagggcaattctaggaaa
ggaactttggaatccgatagtggtagctccaatgcacagattagcacagtaggtcagacc
tctagggaacagcagtcaaagatggaaaatgcgggtgttaactttgtctctggcagagaa
caggctcaaattcataacactgatggaccaaaaaatggaaacactaactccttgaactta
agttcaccaaaccctatggagaataagggaatgccctttgaaatgggcttggggaaccct
tccaggagcactgacaccccttctcagagcactggagaaagaaagatgggaagtgttgga
tcttggggtacagctagggggtcttctgaaaccaacactgtctctgggcagagcaattct
ggaaaccatgggagcaatggaaaggatagagaggactcctggaaaggagcttctgttcaa
aagcctaatcggtcaagaagtgattcttgggataacagtaaccagtctacgggtggtggg
tcttggaactttggccctcagcatgcaaatgaaagcaaatggggtgaaggtaacaaatta
acatctggggtctctcagggagaatggaaacatctgtctgggtctgatgaactgaagatt
ggagagtggagtggtccaaaccaaccaaattctagtactggagcatgggacaatcaaaaa
ggccacactcttcctgaaaaccaaggcaattcccaggcaccctgttggggaagatcttcc
agctctgcgggaagtgaggttggaggtcaaagcactggaagcaaccacaaagcaggaagt
agtgacagtcacaattctggacgccgatcatacaggcctacacatcctgattgtcaggca
gtcctgcagactttgctgagcaggactgacttggaccctcgagtgctttcaaacaccggc
tggggccagactcaaattaagcaagacactgtgtgggatattgaagagatgccgcggcct
gaggggaagtctgataaaggaactgaggggtgggagagctctgccacccagacaaagaac
tcagggggctggggcgatgtacccagccaaagcaatcaaaacaagtctggttggggtgag
ctctcaaccccagcggagtggaaggaccccaaaaatactggaggatggaatgactataag
aactccagttcctcgaattggggaggaggaaggcaagaagaaaaatcctcttcttcttgg
aatgacagctctagtaaggatcaggggtggggtggacggcaaactaatcaaggatggtct
tctggaaagaacggctggggagaggaagttgaccaaacaaaaaacagtaactgggaaagt
acgggaaacaagccagtatctggttggggtgaaggtgggcaaaatgagattggaacttgg
ggtaatggtgcaaatacaagctctgcttcaaagggtggatgggatgattgtaaaagaact
tcaacatggaacgagacgggtcgacagcccagctcctggaacaagcagcagcaacagcac
cagcagcaacagcaggagtcttctggttcctggggtccaccaccccaaactccaagtaat
gggcggcctccaaacccaaactggaacagtggaccacagtcagctgcccccaaagaggag
gagcctagtggctgggaagaaccttctccacagtcaatcagtcgaaaaatggatattgat
gatggcacttcagcgtggggagatcctagcagttataactacaagaatgtgaatctgtgg
gacaagaactcacaaggaggacaggccccacgggagcagagcctgcctactccaatgact
agcaaatcacaagcatcagtctggagcaaaagcactccacctgctccagataatggtacg
tctgcctggggtgagccaaatgaaaccagtcccgggtggggtgaagtagatgatacagga
gcatcgactacaggctgggggaatgcaccttccaatgccccgaatgccatgaaatctagt
tctaaatctatgcaagatggctggggagagagtgatgggccagtgacaggaacacgtcat
tccagctgggaagaggaggaggagggaggagtctggaacacagcaggctcacagggaagc
agttcctcccacaactcaacaagctgggggcaaggaggaaagaaaacacaaatgaagtgt
gcgttaaaaggaggaaatagtgattcgtggatgaaccctttatccaaacagttttcaaac
atgggcttgctaagtcaaactgacgacattccaggcagtaagatggacttgtctgtaggt
ggtctcccagataaaaagtttgaggtagataaacgagccatgaatctcggggattttaat
gacatgatgagaaaggatcgatctgggttccgtccacctaattccaaagacatgggaacc
acagatagtgggccttactttgagaagctgactttgcctttctccaatcaagatgggtgc
cttggggatgaggctccctgctctcccttctccccttctcccagctacaagctgtctccc
tctggttccacactatccagcgtcggccttggggcaatcggctcagggctcagtccccaa
aacttcgctgctagacaaggtggcaatcatggtttgtttggaaacagcacagcacaatcg
aggggcatgcacacgccagtgcagccactaaacccttcccccaatatccgggcgcaagtg
cctccccagttcctttctccccaggtttcaacctccatgctcaaacagtttcccaacagt
ggcttgaatcctggtcttttcaatatgggcccccagctttctccacaacagattgccatg
ctgagccagcttccacagattccccagtttcaattagcttgtcagctcctccttcagcag
cagcagcagcaacagctgttacagagccagagaaagttatctcaagctgtgcgacaacag
caggagcaacagattgctcgtatggtgagtgccctccagcagcagcagcagaggcagcct
ggcatgaagcattcgccatcccaccctgttgggcctaagccacatttagacagcatggta
cccaatcctttgaatgtgggtctctcagatttacagagcaaagggcagatacctggatac
ggttcaggtggctttggctcaagtggcatggattatggcatggtgggagggaaagaggct
ggaacagaatcgcgctttaagcagtggactatgatggaagggctgtcctctgtggcttca
caagatgccaatatgcacaaaaatggtgcaatagtgccccctggaaaggctcgtggagga
tcgccctacaaccagtttgacataatccagggcgacccactcagcagccatgcaggccct
gctggtgatagttggttacctgccaaatctccacccacaaacaagatcggaagtaaatcc
agcaatgccagctggcctccagagttccaaccaggagtgccatggaaaggtatacagaat
attgaccctgaatctgatccctacgtgacccctggaagtgtactgggggggacagccaca
tctcctattgtagatactgaccaccaacttctgcgggacaataccacagggtctaactct
tccctcaacacctcgctgccttcacctggtgcctggccctacagtgcctctgacaattcc
ttcaccaacgttcatagcacttcagcaaaattcagtgattacaaatcagcatggtcccca
gatcccataggacacaatcccactcatctctccaacaagatgtggaaaaaccatatttcc
tcaaggaacactacagggctgcctcgcccacctcctggcctgaccaaccccaaaccatca
tctccatggaacagcacagcaccccgatcagtcaggggctggggggcacaggactcaagg
cttggctctgcatctacttggagtgatggtggctcagttcgtcctagctactggctggtt
cttcacaatctcactccacagattgatggttcaaccttgaggacgatctgcatgcagcat
ggcccactgctgacattccatctgaacctgacccagggcaccgccctcatccgatacaac
accaaacaggaggcggccaaggcccagactgcactgcacatgtgcgtgttgggaaacact
accatcctggctgagtttgccacagatgaagaggttagtcgctttttggcacaagctcag
ccccctacacctgcagcaaccccaagtgcacccgcagcgggctggcaatccctggagaca
ggacagaaccagacagatccagttggacctgctttgaatctctttggtgggtcaacaggg
cttgggcagtggagcagtggtggcggcggcggcagcagtgggggtgatctcactggcgct
tcattgtgggggcccccaaactattcttcaagcttgtggggcgtcccaagcgtagaggat
ccacacagaatgggcagccctgctcccttactacctggagaccttctgggaggagggtcg
gattcaatctga
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integrated database retrieval system
