Hirundo rustica (Barn swallow): 120751737
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Entry
120751737 CDS
T09369
Symbol
CACNA2D4
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04010
MAPK signaling pathway
hrt04260
Cardiac muscle contraction
hrt04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120751737 (CACNA2D4)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120751737 (CACNA2D4)
04261 Adrenergic signaling in cardiomyocytes
120751737 (CACNA2D4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120751737 (CACNA2D4)
Ion channels [BR:
hrt04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120751737 (CACNA2D4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
VWA
dCache_1
VWA_2
VWA_CoxE
CobT_C
Motif
Other DBs
NCBI-GeneID:
120751737
NCBI-ProteinID:
XP_058276121
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All DBs
Position
4:74991065..75115340
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AA seq
1096 aa
AA seq
DB search
MMMVMVMMMLGLLCLPPCARAQTRIPLETVKAWADAFGGELYSVATKYSGSLLLQKKYKD
VEPTLKIKEVDGLELVKKFSEQMESMLRRKVEAVERLVEAAEDADLNHEYNSSLEFDYYN
SLLINDKDENDNYVELGDEFILEPNEHFNNLLVNTTYSDIQLPTNVYNKDPAILNGVYMS
EALNPVFVDNFERDPTLTWQYFGSSTGFFRLYPGIKWLPDENGVISFDCRNRGWYIQAAT
SPKDIVIIVDVSGSMKGLRMTIAKHTIVTILDTLGENDFVNIIAYNDYVHFIEPCFKGIL
VQADRDNREHFKQLVDELQAKGVGTVNKALTESFKILREFREAGQGGLCNQAIMLITDGA
VEDYEAVFEKYNWPDRKVRVFTYLIGREVTFAPNVKWIACNNKGYYTQISTLADVQENVM
EYLHVLSRPMVINHDHDIIWTEAYMDSALPQSEELFASQAQSLLLMTTVAMPVFSKKNET
RSHGILLGVVGSDVPLRELLKLAPRYKLGVHGYAFLNTNNGYILSHPDLRPLYKEGKKLK
PKPNYNSVDLSEVEWEDQDEILRSAMINGETGYLSMDVKVPVDKGKRVLFLTNDYFFTDI
TGTPFSLGVVLSRGHGEYILLGNTSVEEGLHDLLQPDLSLANEWIYCITDIDPDHRKLSQ
LEAVIRFLTGEEPDLECDEELVQEVLFDAVVTAPMEAYWTTLALNMSLDTEAGVEMAFLG
TRAGLMRSALYVGSEKISNKKFLTPKDKESIFTMDHFPLWYRRAAEHPPGSFIYSIVSED
ESEGGGLPKVVTVSTAVSVSVDGKMGIAAAVGVQIKLDLLQRKFWMAMQQPNDSDCSGVD
GACPLSCQDDILNCFLIDNNGFILVSKIPEETGKFFGAVDGSVMTQLLNMGMFRRVTMYD
YQAMCKVHFHHHSGARPLLSPIYAFVAAVKWLISDFLIFLLEFNMSSFWHSDNLADAKAV
FHHSHRHKKHDTLQPCDTEYPVFVYEPAIKETNGLIDCGGCQKMFVAQQIVSSNLLLLVT
DAVCDCSVFPPVPMDVKEVKYIASVKCERMRSQKLRRRPDSCHAFHPEENAQDCGGAAGI
SVCPTLLLLPLVLLLR
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggtgatggtgatgatgatgctcggtctgctctgcctcccgccctgcgccagg
gcccagaccaggatcccgctggagacggtgaaggcctgggcagatgcctttggtggggag
ctgtactccgttgcgactaagtattcgggctctctcctgttgcagaagaagtacaaagac
gtggagcccaccctgaagatcaaggaggtggacggcttggagctggtgaagaagttctcg
gagcagatggagagcatgctccgcaggaaggtggaagctgttgagaggctggtggaggcg
gcggaagatgcagatctgaaccacgagtacaactcctcgctggagtttgattactacaac
tctctcctgattaatgataaggatgaaaacgacaattatgtggagcttggggatgaattc
attctggagccaaatgagcatttcaataacctgctggtgaacacaacctacagcgatatc
cagctgcccaccaatgtctacaacaaagaccctgccatcctcaatggagtttacatgtca
gaagccctgaatcccgtttttgtggacaactttgagagggatcccacgctgacctggcag
tactttggcagctccacgggattcttcaggctgtacccaggaatcaagtggctaccagat
gagaacggggtcatctcctttgactgcagaaaccgtggctggtacatccaggccgccacc
tctcccaaggacattgtcatcatcgtggacgtcagtggcagcatgaaggggctgaggatg
accattgccaagcacaccatcgtcaccattttggacacgctgggagaaaacgactttgtc
aacatcattgcgtacaatgattacgttcacttcatcgagccctgtttcaagggcatcctg
gtccaggcagacagagataacagagagcacttcaagcagctggtggatgagctgcaggca
aaaggagtggggactgtgaacaaggctttgacagagtccttcaaaatcctgagagagttc
agagaagctggccaaggaggtctgtgcaaccaagccatcatgctgatcaccgacggagcc
gtggaggactacgaagctgtgtttgaaaagtacaactggcccgacaggaaggtgcgggtg
ttcacgtacctcatcggacgggaggtcactttcgccccgaacgtgaaatggatcgcctgc
aacaacaaaggctactacactcagatctccacgctggcagacgtccaggagaacgtcatg
gagtacctgcacgtgctcagccggcccatggtcatcaaccacgaccacgacatcatctgg
acagaagcctacatggacagcgcgctgccacagtctgaggagctgtttgcgtcgcaggcg
cagagcctgctgctcatgaccacggtggccatgccagtgttcagcaagaagaacgagacg
cgctcccatggcattcttctgggtgtggtgggctctgatgtaccactgagggagctgctg
aaactcgctccccggtataagctgggtgtccatggctacgccttcctgaacaccaacaac
ggctacatcctttcacacccagacctccgtcctttgtacaaagaaggaaagaaactgaag
cctaagccgaactacaacagcgtagatctctcagaagtggagtgggaagatcaggatgaa
atactgagaagtgctatgatcaatggggaaacaggctacctctccatggatgtgaaggtc
cccgtggacaaagggaaacgagttctcttcctcaccaatgattatttcttcacggacatc
actggcacacccttcagcctgggtgtcgtgctgtccagggggcacggggagtacattctg
ctggggaacacttcagtggaagaaggtttgcatgacctgctccagccagacctgtcttta
gcaaacgagtggatttactgcatcaccgacattgatcctgaccaccggaagctcagccag
ctggaggctgtgatccgtttcctcactggagaggagcctgacctggaatgtgacgaggag
ttggtccaggaagtgctgttcgatgcagtggtcactgcccccatggaggcctactggaca
acactagccctcaacatgtccttggacaccgaggcaggtgttgagatggcgtttctgggc
actcgggctgggctcatgaggagtgccctgtatgtgggctctgagaagatttccaacaag
aagttcctgacgccgaaggacaaggagagcatcttcaccatggatcacttccctctgtgg
taccgcagggcggccgagcatccccccggcagcttcatctacagcattgtctcggaggat
gagtcagaggggggtggcctgccaaaagtggtgacagtgagcacggctgtgtctgtgtct
gtggatgggaagatgggaattgctgcagcggtgggcgtgcaaataaagctggatttgctg
caacgcaagttttggatggccatgcaacagcccaatgacagtgattgcagcggcgtggac
ggcgcctgcccgctcagctgccaggatgatatcctgaactgcttcctcattgacaacaac
ggctttatacttgtttccaaaatacctgaagagactggaaaattttttggcgcagtggat
ggctcggtgatgacccagctgctgaacatgggcatgttcaggcgggtgaccatgtatgat
taccaggcaatgtgcaaggtgcacttccaccaccacagcggcgcccggccactgctcagc
ccaatttatgcctttgtagctgcagtgaagtggctgataagtgatttcctcatcttcctt
ttggagtttaacatgagtagcttctggcactcagacaacttggcagatgccaaggctgtc
ttccaccactctcaccggcacaagaagcacgacacgctgcagccctgcgacaccgagtac
cccgtgttcgtgtacgagccggccatcaaggagaccaacgggctcatcgactgcggcggc
tgccaaaagatgtttgtggctcagcagatcgtcagcagcaacctcctgctcctggtcacg
gacgccgtctgcgactgcagcgtcttcccacccgtcccaatggatgtcaaagaggtcaaa
tatatcgcctcggtgaagtgcgagaggatgcgctcgcagaagctgcgccggcggccggac
tcgtgccacgccttccaccctgaggagaacgcccaggactgcggtggcgctgctggcatc
tccgtgtgcccgacgctgctgctgctgccgctggtgctgctgctgcggtga
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