Hirundo rustica (Barn swallow): 120751785
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Entry
120751785 CDS
T09369
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120751785 (TRAPPC8)
Membrane trafficking [BR:
hrt04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
120751785 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
SNAP
Motif
Other DBs
NCBI-GeneID:
120751785
NCBI-ProteinID:
XP_039918084
LinkDB
All DBs
Position
1:44333161..44384934
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AA seq
1470 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPLVAALCSEEAERLTRRNNLSFAELVRPFCRLTSEVHMRDPNN
QLHIIKNLKIAVNNIITHPPQPGAIQKLLHDVVSVSQPAEGLVANVITAGDYDLNISDRS
VKASVPWYSNWKETLMELNTSTFYSATTPWFESYRECFLQSMPASDHEFLNHYVACMLVV
SSSEPDPVEQFLKLSQEQHRIQHSSEYSYPKWFIPNTLKYYVLLHDVSTGEEQRADSIYE
EMKQRYGTQGCYLLKINSRVSNRGADEQIPDPWSQYLQKSTIQNQDSYEDYTVSNKNTDH
LISDGIDSEIKDGLSNNFKTHPLQLDHPSGSLDSTDYMKASTSLQDSKKSNSGTPHGACL
TLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKVPE
KSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFLNDQAMLYAA
GALEMAAVSAFLQPGAPRPYPAHYMETAIQTYRDTCKNMVLAERCVLLSAEILKSQSKYS
EAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKFAFHMILAGHRFSKAGQKKHA
LRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQLDNAVSAFRHILINDSKQPPAQQG
AFLREYLYVYKNATQLSPDGPLPQLPLPYINSSATRVFFGHDRRPAEGEKQAATHVSLDQ
EYDSESSQQWKELEEQVVSVINKGTIPSNFQPTQFCLNRYSDNSKFPLAVIEEPITVEVS
FRNPLKVPLLLTDLSLLWKFQPKDFSAKHDGETKEQGTCDESMVGTEAIAEFLINSEETK
VARLKLFPHQTGELHILGVVYNLGSVQGAVSLDGIDPSIGLQTGKFVSNGLSVRGRQDLE
IQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFINFPTGLLCGEIRKAYVEFVN
VSKCPLTALKVVSKHPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDPTSVRTALLSSA
SSADFGVGTGGSPEVIQVPLPDAVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESIRKH
SKMCHRVLRHTAVICTSRSLHIRATVCRSNALGDEEGRGDNMLLFVDVENINTSETGVKE
FHIVQVSSNSKHWKLQKSVNISGDKDTKLASRERAKLCFKAVRCKNSEENYTFADIVFGN
EQIISSASPCADFFFQSLSSEFKRTHVQSHTHASQRAVKQSFDETVRLIQRCSEVDLNIV
VLWKAYVVEDSKQLILEGQHHVALNTIGKEAFSFPQKQGFKKILGNSDWEDLEQELPETV
LLKFFRPENTPVPARPTPEQLSNLIKTSLHYPESFNHSFHQKSLCLVPVTLLLSNCSQAV
VDVMIDLRHKPTSSEALEIHGSFTWLGQTQYKLQLKGQEVYSLQLKACFVHTGVYNLGTP
RVFAKLVDQATLFETSQQNSMPALIIINNI
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagttcatccaggactcgttcgtgcccttggtg
gccgcgctgtgcagcgaggaggcggagcggctcacccgcaggaacaacctcagcttcgcc
gagctggtcaggcccttctgccgcctcacctcggaagttcacatgagagatcccaataat
cagcttcacatcattaaaaatttgaagatcgctgtcaacaacatcattactcatccacct
cagcctggtgccattcagaaacttttgcatgacgttgtgtctgtcagtcagcctgctgaa
ggactggtagctaatgtgatcacagctggagattatgatctcaatatcagtgatcgctca
gttaaagctagtgttccttggtacagtaattggaaagagacactgatggaactgaacaca
tccacgttttattcagctactactccttggtttgagtcttacagagagtgctttcttcag
tccatgcctgcgtctgaccatgaattcttaaaccactatgttgcctgtatgctggtagtt
tcttctagtgaacctgaccctgtggagcagttcctgaagctgtcccaagaacaacatcgg
attcagcacagtagtgaatactcatatcccaagtggtttataccaaacacgctcaaatat
tatgtcttactgcatgatgtaagcacaggagaggagcaaagagctgactccatttatgaa
gagatgaaacagagatatggaactcagggttgctatttgctgaaaataaattctcgggtg
tctaatagaggagcagatgaacagataccagatccttggagtcagtaccttcagaaaagc
actattcagaaccaggattcttatgaagattatactgtttcaaacaagaatactgatcac
ttgatatcagatggcatagacagtgaaattaaagatggcttgtcaaataactttaagact
cacccccttcaactggatcatcccagtggcagtttggatagcactgattacatgaaggct
tctacatcactgcaagactcaaagaagtcaaattctgggacacctcatggtgcttgttta
actctcacagatcacgatcgaattaggcagttcatacaggaattcacatttcggggactt
ttgccacacatagagaaaacaattcgacagctcaatgatcagttaatatccaggaaaggc
ttgagccgatcactgttttctgctactaaaaaatggtttagtggcagcaaggttccagag
aaaagtataaatgaactcaagaatacttctggtttgctgtatccaccagaagcaccggag
cttcaaatccggaaaatggcagacttgtgctttttggtgcaacactatgaacttgcatat
agctgttaccatacagcaaagaaagacttcttaaatgatcaggcaatgctttatgcagct
ggagcactggaaatggcagcggtatcagcttttcttcagcctggagctcctaggccatat
cctgctcattatatggagacagcaattcagacctatcgagatacctgcaagaacatggtt
ctggctgaacgctgtgtactgcttagtgctgaaatcttaaaaagtcaaagcaaatattca
gaggcagctgctcttctcattcgtttaaccagtgaggattcagatcttcgcagtgcactc
ctgttggagcaggcagcccattgttttataaacatgaaaagtcccatggttagaaagttt
gcatttcatatgatattggcgggccacagatttagtaaagcaggccagaagaaacatgcc
ttacgttgctactgtcaagccatgcaggtttacaaagggaaaggctggtctcttgcagaa
gaccacattaacttcaccatcggtcgtcagtcctttacacttcgacagctggacaatgct
gtgtctgccttcaggcatattttgatcaatgacagtaaacaacctccagctcagcaagga
gcttttttaagagagtatctttatgtctataagaatgcaactcagctgtcacctgatggt
cccttaccacaacttcctttaccatatattaacagctcagcaactcgtgttttctttggc
catgatcgacgaccagcagaaggcgaaaagcaggcagctacgcacgttagcctggatcag
gaatatgactcagaatcatcacaacagtggaaggagctcgaggagcaggttgtgtctgtg
ataaataaaggaacaataccttcaaactttcaaccaacgcagttctgtttaaatcgctac
tcagataactccaagtttcctcttgctgtgatagaagaaccaataacggtagaagtgtcc
ttccgaaaccctctgaaagttccacttcttttgactgacctttcattgctgtggaagttt
caacctaaagacttcagtgcaaagcatgatggagaaacaaaagagcagggtacatgtgat
gaaagtatggtaggaactgaagcaatagcagaatttttaattaacagtgaggagacaaaa
gtggcaagactaaagctctttccccatcaaacaggggagctacatattctgggagtcgtt
tataatcttggcagtgttcaaggtgctgtgtcattagatgggatagatccttctattgga
ttacagacaggaaagtttgtttccaatgggttatctgtacgagggcgacaagatttagaa
atccaaggacctcgacttaataacacaaaagaggaaaaaacatcaattaaatatggaccc
gatcgacgtttagatcccattattacagaagaaatgcctttgttagaggtgttctttata
aattttcctacggggcttctctgtggagaaatcagaaaagcatatgtagaatttgtgaat
gtaagcaagtgtcctcttactgcactgaaggttgtgtctaagcatccagaatttttcaca
tttggtggaaatactgctgttctaacgccactaagtccttcagcctctgagaactgtagt
gcttacaagactgttgtgacagatcctacctctgtgcgaacagcactgctgtcttcagct
tcttctgcagactttggggttggcacgggaggttcacctgaagtaatacaggttccactt
cctgatgctgttcttcttcctggggcttcagtgcagctgccaatgtggttacggggacca
gatgaagaaggcgttcatgaaattaacttcttgttttactatgaaagtattagaaagcac
tcaaaaatgtgtcatagagtactaaggcacactgcagttatttgtaccagccggtctctg
cacattcgggctactgtctgcagaagtaatgcacttggggacgaagaaggcagaggggac
aacatgttgctctttgtggatgtagaaaatattaatactagtgagacgggtgttaaggaa
tttcatatagtgcaagtttcaagcaacagcaagcactggaagcttcaaaaatctgttaac
atctctggagacaaagatactaaactggcgagcagagagagagcaaagttgtgttttaaa
gcagtgagatgcaaaaactcagaagaaaattacacatttgcagatattgtctttggaaat
gaacagataataagttcagccagtccttgtgcagacttctttttccaaagcttatcctct
gaatttaaaagaacacatgtgcaatctcatactcatgcatctcaaagggcagtgaaacaa
tcatttgatgaaacagtcagattgatacaaagatgcagtgaagttgatttgaacattgtg
gtactgtggaaggcatatgttgtggaagacagcaagcagcttattttggagggccagcat
catgttgcccttaacacaattgggaaggaggccttttcatttcctcagaagcagggtttt
aaaaaaatactcgggaattctgattgggaggacttggaacaggagctgccagaaacagtt
ctcttaaagttttttcgaccagaaaacacaccagtacctgcaagaccaacaccagagcag
ctttctaatcttattaagacaagtcttcattatccagagtctttcaatcattcttttcat
caaaaaagcctctgtctggtacctgtgactctcctgctttccaattgttcccaggctgtt
gtagacgtgatgattgatttgcggcataaaccaacaagctctgaagcactagaaatacac
ggatcttttacgtggcttggccaaacacagtacaagcttcaacttaaaggccaggaggtc
tatagcttgcagctcaaagcttgctttgttcatacaggtgtctataaccttggaaccccc
agagtatttgccaagctcgtggaccaagctactttgtttgaaacaagtcagcagaactcc
atgcctgcactgattattatcaataatatctga
DBGET
integrated database retrieval system
