Hirundo rustica (Barn swallow): 120751918
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Entry
120751918 CDS
T09369
Symbol
CACNA1I
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04010
MAPK signaling pathway
hrt04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120751918 (CACNA1I)
04020 Calcium signaling pathway
120751918 (CACNA1I)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120751918 (CACNA1I)
Ion channels [BR:
hrt04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120751918 (CACNA1I)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
YopJ_bacilli
Motif
Other DBs
NCBI-GeneID:
120751918
NCBI-ProteinID:
XP_039918385
LinkDB
All DBs
Position
4:complement(52673081..52869744)
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AA seq
2190 aa
AA seq
DB search
MAEYIPHPPSTWPAGPQPPHTSAICPLEPVDPGISEQQTPSEQPPSSLELGEDEEVTLPP
DPDVPYPDLAPVVFFCLKQTTSPRSWCIKMVCNPWFECVSMMVILLNCVTLGMYQPCEDM
DCLSDRCKILQVFDDFIFIFFAMEMVLKMVALGIFGKKCYLGDTWNRLDFFIVMAGMVEY
SLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGI
IGVQLWAGLLRNRCFMEENFTLQGDIVLPPYYQPEDDDEMPFICSLSGDNGIMGCHEIPP
LKERGHECCLDKDDYYYYNSVRQGFNISGMCVNWNQYYNVCRTGNANPHKGAINFDNIGY
AWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETK
QREHQLMQEQRARYLSSSTVASYMEPGDCYEEIFQYVCHILRKAKRRSLGLYNSVQSWRH
GHVQESGDAKPGVNRKSQRHYRLCQQHNSLGCPPQGLVQPIAVTATSDPTNCPRCHREEH
EASRLSVLDSTGSDQEDEGGGEGEGEGSQEDQGASVLEEVEEGGRLKLCHDVWREVRVKL
RVIVDSKYFNRGIMIAILVNTISMGIEHHEQPEELTNILEISNVVFTSMFALEMILKLAA
FGLFDYLRNPYNIFDSIIVIISIWEIIGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLV
VLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLRTDTGDTVPDRKNFDSLLWAIVT
VFQILTQEDWNVVLYNGMASTSPWASLYFVALMTFGNYVLFNLLVAILVEGFQAEGDANR
SYSDEDQSSSNVEEFDQFQEVQEGSDPKLCAIPVTPNGHLDPSLPSSNPPVISGGVTNSS
RNLLQLDQIHVAVGSRKSSVMSLGRMTYDQQSLSSSHSSHYGARSRSGAWGSRRSSWNSL
ARGHSLKHKPPSAEHESLLSGEMHKVADGEPDGTGSMFHHHRTLSLDYKGSCDLLELASV
PSDHRVTHKLGPSPGASEHQDCNGKMPSIVKEIFPKMNNHKEQGEDDEEIDYSLCFRIRK
MMEVYKPDWCELREDWSIYLFSPQNRFRLLCQTIIAHKLFDHVVLAFIFLNCITIALERP
QIEHRSTERIFLTVSNYIFTAIFVAEMTLKVVSLGLYFGDQAYLRSSWNILDGFLVFVSL
IDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNIVLI
CCAFFIIFGILGVQLFKGKFYHCLGVDIRNITNRSDCVAANYKWVHHKYNFDNLGQALMS
LFVLASKDGWVNIMYNGLDAVAVDQQPVTNNNPWMLLYFISFLLIVSFFVLNMFVGVVVE
NFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLPYYATYCHIRLLIHSVCTSHYLDIF
ITFIICLNVVTMSLEHYNQPVSLETALKYCNYLFTTVFVFEAVLKLVAFGLRRFFKDRWN
QLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTV
VQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHATFENFGMAFLTLF
QVSTGDNWNGIMKDTLRDCSHDDRSCLSNLQFISPLYFVSFVLTAQFVLINVVVAVLMKH
LDDSNKEAQEDAEMDAELEMEITHGLCSHKSGSPNSGQRKGAGTGGGGGRTDPEGHLCMR
CYSPAQENLWLDSVSLIIKDSFDGELMIIDNLSGSVFHHYSSPAMCEKCNHDKQEVQLAE
MEALSLNSDKSSSILLGDESDNQNSAQLSPKEIKHNGQDNPDSTGADSLGECLLPASSED
GSANPDSYLCEMENTSFNSVQSWLKHESTKVPPSRFSSGASSPLLPVPTEFFHPAISATQ
TGPEEVSCPHNLPKISLQGPWASLRSPGVNCSLLYQSPESDTSLDSRSSGSAGSLQTTLQ
DKRLSLSDSPQCTLDLPVALCPVPAAGSQRPPAAPPSPASRRRSLRGRGIFNLRSLRRHQ
RSHSSGGSTSPGCTQHDSMDPSDEEGAGSSLRGGGNNSEPSETLSSLSLTSLFSPPPPAL
TLVKKCSSTSSLHASPSPRRPAAHHAKPFYTVDPRGFLSMPSWLTDFCKDTPSPREGEEP
DGPGRLGTGDRSSALPSELELGDGVSKRNR
NT seq
6573 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtacatcccccatcctccctccacctggcccgcaggcccacagccccctcac
acttctgccatctgcccgctggagcctgtggatccggggatctcggagcaacaaacacca
tcggagcagccaccgtcctctctggagctgggtgaggatgaagaagtcaccttacctccg
gatcctgatgtcccctacccagacttggccccagttgtcttcttctgcttgaagcagacc
accagcccacggagctggtgtatcaaaatggtgtgcaacccctggttcgagtgtgtcagc
atgatggtgattttgctaaactgtgttaccctgggaatgtaccagccatgtgaggatatg
gactgcctttctgacaggtgtaaaatcttgcaggtgtttgatgatttcatcttcatcttc
tttgccatggaaatggtcttgaagatggtggccctggggatatttggcaagaagtgttac
ttaggagatacctggaaccgcctggatttcttcattgtcatggctgggatggtggaatac
tccctggatctccaaaacattaacttgtctgcaatccgtactgtccgtgtcctgagaccc
ctgaaagctatcaaccgtgtgcccagcatgcgtatccttgtgaacctgctcctggacacc
ttgcccatgctggggaacgtccttcttctctgcttctttgtcttcttcatctttggcatc
attggggtgcagctgtgggctgggctgctccgcaaccgctgcttcatggaggagaacttc
acattacaaggtgacattgtcctgcccccttattaccaaccagaggatgatgatgagatg
ccctttatctgctcgctgtcaggagacaatggaattatgggctgtcacgaaataccccca
ctgaaggaacgaggccatgagtgttgtttggacaaggatgattactattattacaattca
gtccggcaagggttcaatatcagtggcatgtgtgtgaactggaaccagtactacaatgtg
tgccgcactggcaatgccaacccgcacaagggtgccatcaactttgacaacattgggtat
gcctggattgtgatatttcaggtgatcacactggaggggtgggtggagatcatgtactat
gtgatggatgcccattccttctacaattttatctactttatcttgttgataatcgtgggc
tccttcttcatgatcaacctgtgcctggtggtcatcgccacacagttctcagagaccaag
cagcgggaacaccagctgatgcaggagcaaagggcccggtacctctcctccagcaccgtc
gccagctacatggagccgggagactgctacgaggagatcttccagtacgtctgccacatc
ctgcgcaaggccaagcgccgcagccttgggctgtacaacagcgtgcagagctggcgccac
ggccacgtgcaggagtctggcgacgccaaacctggcgtgaacaggaaaagccagaggcac
tacaggctttgccagcagcacaactctcttggctgccctcctcagggcttagtccagccc
attgctgtgacagcaacctctgatcccaccaactgcccccggtgccacagggaagagcac
gaagcatccaggctctcagtcctggatagtactggatcagaccaggaggatgaaggaggc
ggtgaaggggagggagaaggcagccaagaggaccagggtgcctcagtactggaggaggtg
gaagaaggaggacggctgaagctctgccatgatgtgtggcgagaagtgagggtcaagctt
cgagtgattgtggatagcaagtatttcaaccgtgggatcatgattgcaatcctagtgaac
accatcagcatgggcattgagcaccatgaacagccagaggaattgaccaacatcttggag
atcagcaatgttgtctttacaagcatgtttgccctggagatgatcctgaaacttgctgct
tttggtctctttgattaccttcgcaacccgtacaacatctttgacagtatcatcgtcatc
atcagcatctgggagatcattggccaggcagatgggggcctctctgtgctgaggacattc
cgactcctccgggttctgaagctggtgcgtttcatgccagcactgcgccgccagcttgtg
gtgctgatgaagactatggacaacgtagccaccttctgcatgctcctcatgctcttcatc
ttcatcttcagtatcctgggaatgcacatctttggttgcaagttcagcctcaggacagac
acaggagatacagttcctgaccggaagaattttgattccctgctgtgggccatcgtcact
gtcttccagatcctaacccaggaggactggaatgttgtactctataatggcatggcctcc
acctcaccgtgggcttccctctactttgtggctctcatgacatttggcaattatgtactc
ttcaatcttctggtggccattcttgtggagggattccaggctgagggtgatgccaaccgc
tcatactcagatgaagatcagagttcttcaaacgtggaggaatttgatcaattccaagag
gtccaggaaggctcagatcccaagctctgtgcaatccctgtgacacctaatgggcacctg
gacccctccttgccctcttccaacccaccagtgatttctgggggagtcaccaactcttca
cgcaacttactgcagcttgaccagattcatgttgcagttggctcccggaagagcagtgtg
atgtccctggggagaatgacttatgaccagcagtccttgtccagctcccacagttcccac
tacggtgcccggagccgcagcggagcctggggaagccgtcgctccagctggaacagcctg
gcccgaggacacagtctgaaacacaaacctccctcagctgaacatgagtccctcctgtct
ggggaaatgcacaaggtggcagatggggagccagatgggacaggaagcatgtttcatcat
caccggacactctctctggattataaaggctcctgtgaccttctggagttggcctcggtc
ccttctgaccacagagtgacccataagctaggaccatcacctggagccagtgagcatcag
gactgcaatggcaaaatgcccagtattgtcaaggagatcttcccaaagatgaacaaccac
aaagaacagggagaggatgatgaagaaatagattatagcctgtgctttcgcatccggaag
atgatggaagtctataagccagactggtgtgagttacgggaagattggtccatatatctc
ttttctccacagaacaggtttcgcctcctgtgtcaaaccatcattgctcacaagctcttt
gaccatgtagtgctggccttcatcttcctgaactgcatcacgattgctctggaaagaccc
cagattgagcacagaagcacggaaagaatctttctcactgtgtccaactatattttcaca
gcaatatttgtagctgagatgacactgaaggtggtctctctaggcctgtattttggggac
caggcttatctccgcagcagttggaacatcttggatggcttcttggtctttgtgtctctc
attgacattgtggtctcagtggcctctgctggcggtgccaaaatcctgggggtgctgcga
gtgctccggttgctgcgcactctacgtcccctccgagtcatcagtcgagcccctggtctg
aagctggtggtggagacactaatttcctccctcaagcccataggaaacattgtcctcatc
tgctgtgctttcttcatcatctttggcatcctgggtgtgcagcttttcaagggcaagttc
taccactgcctgggggttgacatcaggaacatcaccaaccgctctgactgcgtggcagcc
aactacaagtgggtgcaccacaagtacaactttgacaacctgggacaggctctgatgtcc
ctctttgttctggcttccaaggatggctgggtcaatattatgtataatggacttgatgct
gtggctgttgaccagcagccagtgacgaacaacaacccctggatgctactctacttcatc
tcctttctcctcattgtcagcttctttgtgctcaacatgtttgtgggggtggtggtagag
aacttccacaagtgccggcagcaccaggaggctgaggaggcgcgccggcgggaggagaag
cgcctgcgacgcttggagaagaagcgaaggaaggcgcagcgtttgccgtactatgctacc
tactgccacatacgcctccttattcattcggtctgcaccagccactatctggacatcttc
atcactttcatcatctgcctcaacgtggtcactatgtccttggagcactacaaccaacct
gtgtccctggagaccgccctcaagtactgtaactacctgttcaccacggtcttcgtgttt
gaggcagtcctcaagctggtggcatttggtctgcgacgattcttcaaagacaggtggaac
cagcttgatctggccattgtgctgctgtctgtcatgggcatcacattggaagagattgaa
atcaatgctgctctcccaattaaccccacaatcatccggattatgagggtgctgcgtatc
gcccgggtactgaaactactgaagatggccacaggaatgcgagcactgctggatactgtt
gttcaagccctgccacaggtgggaaaccttggactccttttcatgctcctctttttcatc
tacgctgctctaggagtggagctctttggaaaactggtgtgcaacgatgagaacccatgt
gagggcatgagtcgccatgccacctttgagaactttgggatggccttcctcacacttttc
caggtgtccacaggtgacaactggaatgggatcatgaaggataccttgcgtgactgcagc
cacgatgaccggagctgtctcagcaacctgcagttcatctccccactgtactttgtcagc
tttgtgctcacagcccagtttgtcctcatcaatgtggtggtagctgtgctcatgaaacat
cttgacgacagcaacaaggaggcccaggaggatgcagagatggatgctgagcttgagatg
gaaataactcatgggctgtgctcccacaagtcaggctctccaaattcaggacagagaaaa
ggagcagggacaggaggaggtggtggtagaacagatcctgaaggacatctgtgcatgaga
tgttattctccagcccaggagaacttatggctggacagtgtctctttaattattaaggac
tccttcgacggggagttaatgatcatcgataacctatcgggctccgtcttccatcattac
tcctcgccggccatgtgcgagaagtgtaaccatgacaaacaagaggtccagctggctgaa
atggaagcgttatccctcaactcagacaagtcctcttccattcttctaggagatgagtca
gacaatcaaaactctgctcagctgagtcctaaggagatcaagcacaatggccaggacaac
cctgactccactggggcagacagtctgggggaatgcctgcttccagcatccagcgaggat
ggctctgcaaacccagacagttacctgtgtgaaatggagaatacttctttcaactcagtt
cagtcctggctaaagcatgaaagtaccaaagtccctcctagccgcttctcttcaggtgca
tcttcccctctgttacctgtaccaacagaatttttccacccagccatctctgccacccaa
acagggcctgaggaagtctcgtgtccacacaaccttccgaagatctctctgcaaggccca
tgggcatcactgagatctccaggtgtgaactgctcacttctctatcagtcccccgagagc
gacacgtcgctggacagccggagcagcggctcggccggcagcctgcagaccacgctgcag
gacaagcgcctcagcctcagcgactccccgcagtgtaccctggacctgccggtggccctg
tgccccgtgcctgcggcgggcagccaaagacccccggcagcccccccgtcccccgcctcc
cgccgccggagcctacgcggccgggggatcttcaacctgcggagcctgcgccgccaccag
cgcagccacagcagcggcggcagcaccagccccggctgcacccaacacgactccatggac
ccttcggatgaggagggggcgggcagcagcctgcgcgggggtggcaacaacagcgagccc
tcggagacgctcagcagcctctcgctgacctcgctcttctcgccgccccccccggcgctg
actctggtgaagaagtgcagcagcaccagcagcctccacgccagcccctcgccccgccgc
cccgccgctcaccacgccaagcccttctacaccgttgaccctcggggcttcctctcgatg
ccctcctggctgacagacttctgcaaggacaccccctcgcccagggaaggagaggagcca
gatggccccggcagactggggacaggggaccgcagctccgcgctcccttccgagctggag
ctgggcgacggagtaagcaagaggaacagatga
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