Hirundo rustica (Barn swallow): 120752106
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Entry
120752106 CDS
T09369
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrt01009
]
120752106
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120752106
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120752106
Protein phosphatases and associated proteins [BR:
hrt01009
]
HAD phosphatases
Fcp/Scp phosphatases
120752106
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120752106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
120752106
NCBI-ProteinID:
XP_039918701
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All DBs
Position
4:71104207..71106006
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AA seq
599 aa
AA seq
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MGKPCLQCTGNKYSAAQKHEDAAQRKAVLKAALRKKIESEKKALSIVEQLLEEDITEEFL
LNCGKLITPSHYKDVVDERSIIKLCGYPLCQNKLENVPKQKYRISTKTNRVYDITERKCF
CSYFCYRASKHFEAQISKSPVWMREEEKPPVLELLKEGSSGQSREEVKLIDEVINASAFE
NPRISSDPWQSGSHDTDSDSSTDTEQGFISSVLPGSQSSSANSAQKLHRKSILIRKHPQK
VHVSPKTEDADVVGATVQLSCCKLDTQKEGDAYSVHDEVTAPPSNNTAPGKISVSEIFEN
TCGSQIVFLGVSKRGAEYLRRTLANPRERKTPELKHPVNSKGSLLALLRQTLLEWRTEET
LKFLNGPNYTSLCSSECIASVNQESGELDEDDLDRADDLNTVAVGESENSLNDSLPFTSS
GGIVKPVPSYEKLKEETEFLELRVKEFYKGRCILAEEAVPQAQARKHARKDKDDQQEDFT
FPLIDSNAQMQIRKRIVLEKLRKALSVVLGPLHIGSGNVYTELKNLVKTFRLTNRNIIHK
MPEWILIAIVLLSVLSQTALLFKDTQTSPIYTQFLTTLLEELHFQNEDLRSLTRIFRMD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagccctgcctgcagtgcacaggaaataagtattcagctgctcagaaacatgag
gatgctgctcaaaggaaagcagttctgaaggctgcactgagaaagaagattgaaagtgag
aaaaaagcattgtctattgttgaacagctcttggaggaagacattactgaagagttcctt
ctaaattgtgggaaattgattactccatctcactataaagacgttgttgatgaacggtct
atcatcaaactgtgtggttatcctctgtgtcagaataaactggaaaatgtgccaaagcag
aagtacagaatttcaacaaaaacgaacagagtttatgacatcactgaaagaaagtgcttt
tgcagctacttttgctatagagcatctaaacattttgaagctcaaatttccaaaagtcca
gtgtggatgagagaagaagaaaaaccaccagtcctagaactgctgaaggagggatcaagt
ggacagtctagggaagaggtgaaactaattgatgaagtaattaatgcatctgcctttgaa
aatcctaggatatcttcagatccatggcaatctggttctcatgacacagacagtgacagc
agtacagatactgaacaaggatttatttcttctgtcttaccaggaagtcagtcaagttca
gccaattctgcacagaaattgcacaggaaaagcatcctcataaggaaacatcctcagaaa
gtccatgtcagccctaaaactgaagatgcagatgtggtaggagccactgtacagctctct
tgttgtaaattagatactcagaaagaaggagatgcttactctgttcatgatgaagtaact
gcgccaccttcaaataatactgctcctgggaaaataagtgtttcagagatttttgaaaat
acatgtggatcacagatagttttcctaggtgtgagcaaaagaggagcagaatatctgaga
agaacactagctaacccaagagaacgtaaaacccctgaactgaagcatccagttaattcc
aaaggcagtttactagcactgcttaggcaaacacttctggaatggagaactgaggaaact
ttaaaatttctcaatggcccaaactatacttctttatgctcatcagaatgcatagcatct
gtcaaccaggagagtggagagcttgatgaagatgacttagatagagctgatgatctcaac
actgttgctgtaggggagtctgaaaacagtttgaacgactccttacctttcacaagctca
ggtggaatagttaagcctgtgcctagttatgaaaagttaaaagaagaaacagagttcctt
gagctccgagtaaaagagttctataaaggaaggtgtatcttggctgaagaagcagtgcca
caagcacaagcaaggaaacatgcaagaaaagacaaagatgatcaacaagaagatttcacc
ttcccactcattgattcaaatgcacaaatgcagattaggaagcgaatcgtccttgaaaaa
ttgagaaaagcattatctgtagtattgggccctcttcatattggttcagggaatgtttat
acagagctaaaaaatcttgtcaaaacttttcggttaacaaacagaaatattattcacaaa
atgccagaatggattctcattgctattgttttgttatctgtattgtcacaaacagctctg
cttttcaaggatactcagacaagcccaatatacacacagttcctaaccacattactggaa
gaactacatttccaaaatgaagatctgagaagtttaacaagaatatttaggatggactga
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