Hirundo rustica (Barn swallow): 120752351
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Entry
120752351 CDS
T09369
Symbol
ZBED4
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24640
zinc finger BED domain-containing protein 4
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120752351 (ZBED4)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120752351 (ZBED4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Flu_PB2_4th
Motif
Other DBs
NCBI-GeneID:
120752351
NCBI-ProteinID:
XP_039919222
LinkDB
All DBs
Position
4:18305884..18310762
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AA seq
1172 aa
AA seq
DB search
MDMSKADSPGMDDTFVLGKINNLKVEQEEDSINCTLERTDIKTEQDDFKHADSSDEQDDK
EKNFITNNPGKYLSAENEDDYGSLFSQYSNTLYDVAMEAVTQSLLSSRNISSRKKSPAWN
HFFISPRDSTKAICMYCMKEFSRGKNEKDLSTSCLMRHVRRAHPTVLIQENGTMPGISSF
SSSTLLLPPQSADVGDLSSMLSPIKLVKKMASKIPSPDRIIEESVAIVSSEEISDLSVSE
KCSREEVMVGSSPQQANTQYDDTVENVAEKTVVIPKSASGSRRRSAVWKHFYLSPLDNSK
AVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHRSIVLQENGGGTSIPPLYTAPPTLLPSL
LPPDSDLNSMSSSPGKLMKEPTSVSSSPDRISEEIHANLTSGDTLVEDSMLSSSDDIGEV
SFVSSPEKQCDGLGPLIFEPTAVFQQNKRIMKRLKSEVWHHFSLSPADSLKAVCRYCSCM
ISRGKKGDVGTSCLMRHLYRRHPDVIGNEKSFLDVSLANSPYATLASAECSSSKLTDLPT
MVTHDNQIIFPVNSKKTSKLWNHFSICSADSTKVICTHCGRIISRGKKPTNLGTSCLLRH
LQRFHNNVLKTDVPETVLSSSTDNHMPLRTELLGSSNFDETNDKFCDSHPVAKKITSLVA
EMIALDLQPYSFVDNIGFNRLLEYLQPQYSLPSPSYFSRTAIPDMYDSVKQIIISHLKEA
ESGVIHFTSGIWMSNQTREYLTLTAHWVTFESSFRPQCEDYHCSALLNVSQIDCDYNGIS
IQKQLEYWWETWITSIGLQIGITVTDNQSIEKTLNEGDHSSVQCFSHTVNVIVNEAIKSQ
RMVQNLLSIARKICERVHRSAKAKEKLAELQKEYELPQHQLIQDVPSKWNTSFHMLERLI
EQKRAIDEMSIECSFRELISCDQWEVMQSVCHALKPFEAASREMSTHMSTLSQVIPMIHI
LNRKIEMLFEETMGIDTMLKSLKEAMVSRLSSTLHDPRYIFATLLDPRYKTSLFTEEEAE
QYKQDLIRELEIMSSTSDDDKPVSNGCDIGSPSTNSYGEDNLWSLMGDMKKTKDLKERAK
LPEEMVLSYLEEEVLEHNCDPLTYWNFKKSSWPVLSKLAVRFLGCPPSIVPSERLFNTSN
ESNNFSQSRLMIEHFEKLIFLKVNLPLIYFQY
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggacatgagtaaagcagattcccccggaatggatgatacttttgtattgggtaaaatc
aataacttgaaagtagagcaagaagaagacagcattaactgtactctagaaagaacggat
ataaagacagaacaagatgatttcaaacatgcggacagcagtgacgaacaggatgacaaa
gaaaagaacttcattaccaacaaccctggcaaatatttgtctgcagaaaatgaagatgat
tatggatctcttttttctcagtatagtaatacgctctatgatgtagcaatggaagctgtg
acacaaagccttctttctagcagaaacataagctccagaaaaaagtcacctgcttggaac
catttttttatatctcctagagatagcactaaagcaatatgtatgtactgtatgaaagaa
tttagcaggggtaaaaatgaaaaggacctgagtacaagttgtcttatgagacatgtgagg
agagcacatcccactgtactaattcaagaaaatggaactatgccaggtatatcttccttt
tcttcatctacattactgctgccacctcagtctgctgatgttggagatctgagttctatg
ttatcccccataaaactggtcaagaaaatggcttctaaaataccatctccagatagaata
attgaggaatctgttgctattgtttcttctgaagaaatatcagatctctccgtttctgaa
aagtgcagcagagaagaagtcatggttggttcatctccacagcaagccaacacccaatat
gatgacactgttgagaatgtagcagaaaaaacagttgttattccaaagagtgcatcaggt
tctaggaggagatctgctgtctggaaacacttttatttgtctcctctagataattctaaa
gctgtttgcatccactgcatgaatgaattcagtagaggaaaaaatggaaaagacctagga
acgagttgtttaataagacacatgtggagagcccatcgttccattgtcctgcaagagaac
gggggtggtaccagcataccacctctctacaccgcacctcctactctcttgccatctcta
ctaccaccagatagtgatctgaattctatgtcatcctctccaggaaaactaatgaaagaa
ccaacttctgtttcctcttctccagacagaatctctgaggagatccatgctaaccttact
tctggagatactctagtggaagactcaatgctgtcatcttctgatgatataggtgaagtc
tcctttgtttcatctcctgaaaaacagtgtgatggattaggtccactaatatttgaacct
actgctgtgtttcagcaaaataaaaggattatgaaaaggcttaagtcagaagtgtggcac
catttttcactctcacctgcagacagtctaaaagcagtatgtagatactgcagttgtatg
ataagtcgtggtaagaaaggagatgtgggcacaagctgcttaatgagacatctatataga
cgccatcctgacgtaataggaaatgaaaagagctttctcgatgtgagtttggcaaattct
ccttacgccacattggcttctgcagaatgttcatcctcaaagttgactgacttgcctaca
atggttacacatgataatcaaattatatttcctgttaatagtaagaagacctcaaaactg
tggaatcacttttcaatttgttctgcagattcaacaaaagtaatatgtacgcactgtgga
cgtataataagtagagggaaaaagccaacaaacctaggcacaagttgccttctaagacat
ttgcagcggtttcataacaatgtattgaaaactgatgttccagagacagtattatcctca
tctacggataatcacatgccactccgcacagaattactaggatcttcaaattttgatgaa
accaatgacaagttttgtgactctcacccagttgccaaaaaaatcacaagtcttgtagct
gaaatgattgcacttgaccttcagccatattcttttgtagacaacattggctttaacagg
ctgcttgaatatttgcaacctcagtattctttaccttctccatcttacttttctaggaca
gcaattccagatatgtatgatagtgtaaaacaaataattatttcacatcttaaagaagct
gaaagtggagtgatccattttacatctggaatatggatgagcaaccaaacacgagagtat
ctaaccctgaccgctcattgggtaacatttgagtcttcatttcgaccacagtgtgaggat
taccattgttcagcactattaaatgtatcacagattgattgcgactacaatggaatcagt
attcaaaagcagctagaatactggtgggaaacgtggattacttccattggacttcagatt
gggattactgttactgataatcagagtatagagaaaactttaaatgaaggtgatcattca
agtgtacaatgttttagtcacactgttaatgtaattgtaaatgaggctattaaaagccag
agaatggttcagaatttgcttagtattgcaagaaagatctgtgaacgtgtccatcggtca
gcaaaagcaaaagagaagttagctgagttgcaaaaagagtatgagttgcctcagcatcag
ctaatacaagatgttccatccaagtggaatacgtcatttcatatgcttgagcgtcttatt
gagcagaaaagagcaattgatgaaatgtcaatagagtgcagctttcgggagctaataagc
tgtgatcagtgggaagtcatgcagtcagtgtgtcatgctctcaaacctttcgaagctgca
agtagggagatgagtacacacatgtcgactctaagccaagtgattccaatgattcatata
cttaacaggaaaatagaaatgctatttgaggaaactatgggcatagatactatgctgaaa
tctttgaaagaagctatggtgagtagattgtcctccacacttcatgatccaaggtacatt
tttgctacacttctggatccccggtataaaacatcgttatttacagaagaggaggctgaa
caatataaacaagatttaatcagggagctggaaataatgagttctacctcagatgatgat
aaacctgtttccaatggatgtgatataggttcaccatctacaaattcatatggggaagat
aatctttggtcactcatgggtgacatgaagaaaacaaaagacctgaaagagagagcaaag
ttaccagaggaaatggtgctttcttacttggaggaagaagtgcttgagcataactgtgat
cctctaacttactggaactttaagaagtcatcttggccagtactgtcaaaattagctgtg
aggttcctgggttgtccaccaagcattgttccttcagagagattgttcaatacatccaat
gaaagcaacaattttagtcagtcaaggttaatgattgaacactttgaaaagcttatcttt
ttgaaagtgaatcttccattaatatacttccagtattga
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