Hirundo rustica (Barn swallow): 120752518
Help
Entry
120752518 CDS
T09369
Symbol
SEC31A
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120752518 (SEC31A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120752518 (SEC31A)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hrt02044
]
120752518 (SEC31A)
Membrane trafficking [BR:
hrt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120752518 (SEC31A)
Secretion system [BR:
hrt02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
120752518 (SEC31A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
TPR_Sec16
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Prp18
Beta-prop_HPS5
Beta-prop_IFT140_1st
SRA1
Beta-prop_SPT8
Beta-prop_DCAF4
DUF3724
Motif
Other DBs
NCBI-GeneID:
120752518
NCBI-ProteinID:
XP_039919591
LinkDB
All DBs
Position
5:complement(56099893..56139065)
Genome browser
AA seq
1263 aa
AA seq
DB search
MKLKEIDRTAMQAWSPAQQHPIYLATGTSAQQLDATFSTSASLEIFELDLADPSLDMKSC
ATFSSSHRYHKLIWGPHSMTSGDRVSGVLIAGGENGNVILYDSAKILDGEAEVIIAQKDK
HTGPVRALDVNMFQTNLVASGANESEIYIWDLNNFATPMTPGAKTQPLEDISCIAWNRQV
QHILTSASPSGRATVWDLRKNEPIIKVTDHNNRMHCSGLAWHPEVATQMVLASEDDRLPV
IQMWDLRFASSPLRVLESHTRGILAIAWSMADPELLLSCGKDAKILCSNPNTGEVLYELP
TNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSSDGLRQKQVDQLSSSFGNLDPFG
TGQPLPPLQLPQQTAPQSVVLPLKKPPKWIRRPMGASFSFGGKLVTFENPKSPQQPGMEQ
QQQHPHVYVSQVVTEKEFLARSNQLQEAVQSEGFVSYCQKKIDMALADFERNVWAFLKVN
FEEDSRVKYLELLGYRKDDLRKKITSTLNNEGLADGVLGEAPAESDGSVPNEGDEGQTTE
EQFLGETLKDHKKETEDLGSAKTTFNISVSGDVDGLITQALLTGNFESAVDLCLHDNRMA
DAIILAIAGGQDLLSRTQEKYFAKMRSKITRLITAVVTKNWKEIVQSCDLQNWREALAAV
LTYARPDEFTALCDLLGSRLENEGDSVLQTQACLCYICAGNVDKLVACWTKVQDGNSPLS
LQDLIEKVVILRKAVQLTQAVDPNAMGALLAEKMSQYANLLAAQGSLAAALTFLPANTNQ
PNIVQLRDRLCRAQGELPVGQHGLRGPYEREPTAKGRAGPAAGRMQAPQAPAQQYYQQVR
IAPTVTTWSNKTPTALPSHPPAGCPSDTQGDNPPPPGFIIPGAVGPSMPPQQATSSNYSM
YSQAGTRPAYPQTYQATQQYSSGTGGPALYQPQQPIAAPASASYPSPAPNTAPSYLPSAP
APSMPAPLYPGQPQPSPASLNPVSSFPVPPSGTSFQHGRPGPPATSVAYALPTGPTGTLP
AASDLPASQRTGPQNGWNDPPTLNRAAKKKKVPDNFLPPVPITSPIMNPLADPQLQQPQA
PAPPSSAPGFQPPHLPAGQMVLQGGFQPASQPLGPSIVPPTVSKPSTEGAPGAPIGNAVQ
HVQALPTEKITKKPIPEEHLILKTTFEALIQRCLLSASDPQTKRKLDDANKRLEFLYDKL
REQTLSPTIISGLHNIVKSIETRNYQEGLNIHTHIVSTSNFSETSAFMPVLKVVLTQANK
LGV
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaggaaatagaccgtactgccatgcaggcatggagccctgcccagcagcac
cccatttacctggccacaggtacatcagctcagcagctggatgcaaccttcagtacaagt
gcttctctagaaatatttgagttggacttagcagatccttcactggatatgaagagctgt
gccacgttctcctcctcacacaggtaccacaagctgatctggggccctcacagcatgacc
tcaggggacagagtgtctggagtcctgattgctgggggtgaaaatggaaatgtcattctg
tatgactcagccaaaatcctagatggagaggctgaggtaataatagcccagaaagacaag
cacacgggaccagtgagagcgcttgatgtcaacatgttccagactaatctggtggcctct
ggtgctaatgagtctgaaatctatatctgggacttgaacaactttgctacgccaatgaca
cctggggcaaagacacagcctctggaggacatcagctgcatcgcatggaacaggcaagtc
cagcacatcctgacatccgccagccccagcggccgggccaccgtgtgggatctcaggaag
aacgagcccatcatcaaagtcactgaccacaacaacaggatgcactgctcaggcttggca
tggcaccctgaagttgccacccagatggttttggcctcggaggacgacaggctgcccgtt
attcagatgtgggacctaagatttgcctcctcaccccttcgtgttctagaaagtcacaca
aggggtatactggccattgcttggagtatggcagatccagagctgctacttagctgtggg
aaggatgctaaaattctctgctccaaccctaacacaggcgaggtgctgtacgagctgccc
accaacacccagtggtgctttgatatccagtggtgcccaaggaaccctgctgtgctgtcc
gcagcctccttcgacgggcgcatcagcgtctactccatcatgggcggcagcagcgacggc
ttgaggcagaagcaagttgaccagctctcctcgtcctttgggaacctcgatccgtttggc
acaggccagcccctgcctcccctgcagcttccccagcagactgccccacagagcgtggtg
ttgcctctgaagaaaccacccaagtggatccggcggcccatgggagcgtccttctcgttt
ggaggcaagctggtgacgtttgagaaccccaagtctccgcagcagccgggcatggagcag
cagcagcagcatccccacgtctacgtgagccaggtcgtcacggagaaggagttcctggcc
cgctccaaccagctgcaggaggctgtgcagtccgagggcttcgtcagctactgccagaag
aaaatcgacatggccctggctgacttcgagaggaacgtgtgggccttcttaaaggtgaac
tttgaagaagattcacgtgttaaatacctcgagctcttaggatacaggaaggatgatctg
aggaagaagatcacatctactctgaataacgaaggtcttgcagatggtgtcttgggagag
gctcctgcagaatctgacggatctgtcccaaacgagggggatgaaggccagactacagag
gaacagttcttgggagagacgctgaaggaccataaaaaagaaactgaagacttgggatct
gcaaaaacaacatttaacatttctgttagtggagatgtggatgggctgatcacacaggct
ctgctgacagggaactttgaaagcgcagtggatctgtgcctgcacgacaaccgcatggcc
gacgccatcatcctggccatcgccggcgggcaggacctgctgtcccggacacaggagaag
tacttcgccaagatgcggagcaaaattaccaggctcatcactgcagttgttacaaagaac
tggaaagagattgtgcagtcttgtgacctgcagaattggagagaggctttggctgctgtg
ctcacttatgccaggccagatgagttcacagccctttgcgatctcctgggtagcaggctg
gagaatgagggggacagcgttctgcagacacaagcttgcctctgttacatttgtgccggc
aacgtggacaaacttgttgcttgttggaccaaagttcaggatggaaacagccccttgtct
cttcaggatttaatagagaaggtcgtgatcctgcgcaaagccgtgcagctgacgcaggct
gtggaccccaatgccatgggcgcccttttggccgagaagatgagccagtatgccaacctc
ctggctgctcagggaagcctggctgcagcactgaccttcctccctgccaacaccaaccag
ccaaacatcgtgcagctgcgggaccggctctgcagggcccaaggggagctcccggtggga
cagcacggcctcaggggaccctatgagagggagcccacggccaaagggcgagctggccct
gcggctggacggatgcaggcgccccaggctccagcccagcagtattaccagcaggttaga
attgcccctactgtcactacctggagtaacaaaactcctactgcccttcccagccatcct
cctgcaggctgtccctctgacacacagggggacaacccacctcctccagggtttattatc
ccaggtgctgtaggccccagcatgccaccacagcaagccacatcttccaactacagcatg
tactcacaagcaggaacgcggccagcgtacccacagacgtatcaggccacacagcagtac
tcctctggaacggggggaccagctctctatcagcctcagcagcctattgctgcccctgct
tcagcctcttaccccagccctgcccctaacaccgccccttcctacctgccctctgcccct
gccccctccatgcccgccccgctgtaccccgggcagcctcagccctccccagcgagcctc
aatcccgtctcttccttccctgttcctccttctggcacatcctttcagcatggcaggcca
ggacctccagcaacttctgtggcttatgcattacctactggaccaacaggtactctgcct
gcagccagtgaccttcctgcatcccagagaacagggccccagaatggctggaatgaccct
cccacgctcaacagagctgccaagaagaagaaggtccccgacaacttcctgcccccggtc
cccatcacgtcccccatcatgaacccgctggcggatccgcagctgcagcagccgcaggct
ccagcgccgcccagcagcgcgcccggcttccagcctccacacctccctgcggggcagatg
gtgctgcagggtggcttccagcctgcttcccagcccctggggccatccatcgtgccaccc
actgtttccaagcccagcacggagggggccccgggggccccgatcggcaacgccgtccag
cacgtgcaggcactgccaacagagaagatcaccaagaagcccatccctgaggagcacctt
attctgaagaccacgtttgaagctctcatccagaggtgcctgctgtctgcctctgacccg
caaaccaagaggaaactggatgatgcaaataagcgcctggagtttctgtatgacaaactt
agggaacagacactctctccaaccatcattagcggcttgcacaacatcgtgaagagcatc
gaaacccgcaactaccaggagggactgaacatccacacacacatcgtcagcaccagcaac
ttcagcgagacctctgctttcatgccagtcctgaaggttgtcctcacccaggccaacaag
ctgggggtgtga
DBGET
integrated database retrieval system
