Hirundo rustica (Barn swallow): 120752578
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Entry
120752578 CDS
T09369
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120752578 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120752578 (NUP54)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120752578 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
120752578
NCBI-ProteinID:
XP_039919791
LinkDB
All DBs
Position
5:complement(61625602..61637694)
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AA seq
555 aa
AA seq
DB search
MAFNFSATAGAGAANPTGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVSTTSTP
PFNFGNSLASAGAFGGFGTTATTAAAAFSFSAPTNTGTSGLFGATQNKGFGFGTSFGTGT
GTGLGSGLGTGLGFGGFGTQQQQQTTLGGGLFSQPAQAPAQSNQLINTASALSAPTLLGD
ERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSLMPNNKDEDGLVV
LVFNRKEADIRSQQQQLVESLHKILGGNQTLTVNVEGVKTMPDDQTEVIIYVVERSPNGT
SRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNPPAGVDPIIWEQA
KVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTTTMAKI
AQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQFKGRLN
ELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDLEDIKLIE
HGLNESIPIRGGVFS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcagcgccacggcaggagcaggggccgccaacccgaccggatttggt
gggcttgaaactgcaaactccactgccagtgggtttaattttgggggtttcggattaact
gctaatcccgcggtgaattttaatattgggaatttcggtgtttccactacctcaactcca
ccattcaattttggtaacagtctggcaagcgcaggtgcctttggaggctttgggaccacc
gccaccaccgcggcagcggcgttcagcttctctgctcccaccaataccggcaccagcgga
ctctttggcgctacccagaacaaaggctttggatttggtaccagttttggcacgggaact
ggaactggcttgggtagtgggttgggaactgggctaggctttggaggctttggaacccag
cagcagcagcagaccacattagggggcgggttgttcagccagcctgcccaggcacctgct
cagtccaaccagctcatcaacacagccagcgccctctcagccccgacactgctgggagat
gagagggatgccattctggccaaatggaaccagctccaggccttctggggcacgggcaag
ggatacttcaacaacaacatcgctccagtggagttcacgcaggaaaaccccttctgcagg
tttaaggctgtgggttacagtttaatgcccaacaacaaagatgaagatggccttgtggtc
ttggtgtttaacagaaaagaagcagatattcgaagccagcagcagcagctcgtagaatca
ctacacaaaattttgggaggaaaccagacccttactgtcaatgttgaaggtgttaaaacg
atgccagatgaccagacagaagtgatcatttacgttgtggagcgctcgcccaatggcacc
tcgaggagagttcccgcaacgaccctctacgcccactttgagcaagccaacatcaaatca
tccctgcagcagctgggggtcagtctgtccatggccaggacagagctgtccccggcacaa
gtcaagcagctcctgcagaaccctcctgccggtgttgatcctattatatgggaacaagct
aaagttgataatcctgatcctgataagcttattcctgtgccaatggtgggtttcaaggaa
ctgctgagaagattaaaggtccaggatcagatgaccaaacagcatcaaactcgattagat
ataatatcagaagatatcagtgagctgcagaaaaaccagacgacaactatggcaaaaatt
gcacagtacaaaaggaagctgatggcactttcgcacagaactttgcaggtgctaataaag
caggagatccaaaggaaaagcggttacgccattcaagcagatgaggagcagcttcgtgta
cagttggatacaattcagtgtgaacttaatgcacccacgcagttcaagggcagactgaat
gagctcatgtcccagatcagaatgcagaaccactttggagcagtgcgggctgaagagcgc
tattacatagatgcagacctcttaagggaaatcaagcaacacctgaagcagcagcaagaa
gggctgagtcacctaatcagcatcatcaaggatgacttggaggacatcaagctaatagaa
catgggctgaacgagagcattcccatccgagggggagtcttcagttga
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