Hirundo rustica (Barn swallow): 120752623
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Entry
120752623 CDS
T09369
Symbol
PCDH10
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120752623 (PCDH10)
Cell adhesion molecules [BR:
hrt04515
]
Cadherins
Protocadherins
120752623 (PCDH10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
120752623
NCBI-ProteinID:
XP_039919911
LinkDB
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Position
5:69222547..69361494
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AA seq
1065 aa
AA seq
DB search
MVVLFLFALLWMVEGAFCQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARRFQTAPNSR
SPYLELNLETGVLYVNEKIDREQICKQSPSCLLHLEVFLENPLELFRVEIEVLDINDNPP
SFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRTYEITPNSYFSLDVQTQGDGNRF
AELVLDQPLDREQQAVHRYVLTAVDGGQPQQRTGTALLTVRVLDSNDNVPAFEQPVYTVS
LPENSPPGTLVLQLNATDPDEGQNGEIIYSFSSHISARARELFGIAPRTGRLEVSGELDY
EESSVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFSTVKEAVSEAAAPGTVVA
LFSVSDRDSEENGQVQCELLQGDAPFRLKSSFKNYYTIVTEGPLDREQPGGDAYTLTVVA
RDHGEPPLSTSKSIQVRVSDVNDNAPRFSQPVYQVYVSENNVPGAYIYAVSATDRDQGAN
ARLAYSILESQIQGMSVFTYVSINSENGFLYALRSFDYEQLKEFSFQVEARDAGEEPQPL
AGNATVHIIVVDQNDNAPAIVSPLPGRNGTPAREALPRGAEPGYLVSRVSAVDADDGENA
RLTYSIARGNEAGLFRMDWRSGELRTARRVPAKRDPQRPYELVIEVRDHGQPPLSSTAAV
QVVLVDGAGERSGGGGPAAGTGAGGGGGGSGEHRPSRSGGDNSLDLTLILIIALGSVSFI
FLLAMIVLAVRCQKEKKLNIYTCLASDCCLGCCCCCPCCSRQARARKKKLSKSDIMLVQS
SNVPSNPAQVPVEESGSFGSHHHNQNYCYQVCLTPESAKTDLMFLKPCSPSRSTDAEHNP
CGAIVTGYADQQPDIISNGSILSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSG
HGDSEQGDSDHDATNRGQSSGMDLFSNCTEECKALGHSDRCWMPSFVPSDGRQAADYRSN
LHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHNSLDRKEFDGLLSNTRAPYKPP
YLKHGWQQSNPHPTSPSPSPSRVSHPLPGCSTTKALAISGSQSGL
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgctattcctctttgccttgctctggatggtggagggggctttttgccagctc
cattacacggtgcaggaagagcaggagcatggcacgttcgtggggaatatcgccgaggac
ctgggcttggacattacaaaactttcggctcggcgcttccagacggcgcccaactcccgc
agcccttacctggagcttaacctagaaaccggggtactctacgtgaacgagaagatcgac
cgggagcagatctgtaagcagagcccctcctgcctgctgcacctggaggtcttcctggag
aaccccctcgagctgttccgtgtggagatcgaggtgctggacatcaacgacaacccgccc
tccttcccggagcccgacctcacagtggagatctcggagagcgccacgccgggcacccgc
ttcccgctggagagcgccttcgaccccgacgtgggcaccaactccctgcgcacctacgag
atcacccccaacagctacttctccctcgacgtgcagacgcagggggacgggaaccgcttc
gccgagctggtgctggaccagccgctggaccgggagcagcaggcggtgcaccgctacgtg
ctgacggcggtggacggcgggcagccccagcagcgcaccggcaccgccctgctcaccgtc
agggtgctggactccaacgacaacgtccccgccttcgagcagcccgtctacaccgtgtcg
ctgccggagaactcgccgccgggcaccctggtgctgcagctcaacgccacggaccccgac
gaggggcagaacggcgagatcatctactccttcagcagccacatctcggcccgcgcccgg
gagctcttcggcatcgcgccgcgcaccgggcgcctggaggtgagcggcgagctggactac
gaggagagcagcgtgtaccaggtgtacgtccaggccaaggacctggggcccaacgccgtg
cccgcccactgcaaagtgctggtgcgggtgctggacgccaacgacaacgcgcccgagatc
agcttctccaccgtcaaggaggcggtgagcgaggcggcggcgccgggcaccgtggtggcc
cttttcagcgtctcggaccgcgactcggaggagaacgggcaggtgcagtgcgagctgctg
cagggcgacgcgcccttccgcctcaagagctccttcaagaactactacaccatcgtcacc
gaggggccgctggaccgcgagcagccgggcggcgacgcctacacgctcaccgtggtggcc
cgggaccacggcgagccgccgctcagcaccagcaagtccatccaggtgcgggtgagcgac
gtgaacgacaacgcgccgcgcttcagccagcccgtgtaccaggtgtacgtgagcgagaac
aacgtgcccggcgcctacatctacgccgtcagcgccaccgaccgcgaccagggcgccaac
gcccgcctcgcctactccatcctggagagccagatccagggcatgtccgtcttcacctac
gtctccatcaactccgagaacggcttcctctacgccctccgctccttcgactacgagcag
ctcaaagagttcagcttccaggtggaggcccgcgacgcgggcgaggagccgcagccgctg
gccggcaacgccacggtccacatcatcgtggtggaccagaacgacaacgcccccgccatc
gtcagccccctgcccggccgcaacggcaccccggcgcgggaggcgctgccccgcggcgcc
gagccgggctacctggtgagccgggtgtcggccgtggacgccgacgacggggagaacgcc
cgcctcacctacagcatcgcgcggggcaacgaggccgggctgttccgcatggactggcgc
tccggggagctgcggacggcccgcagggtgccggccaagcgcgacccgcagcgcccctac
gagctggtcatcgaggtgcgcgaccacgggcagccgccgctctcctccaccgccgccgtc
caggtggtgctggtggacggcgcgggcgagcgctccggcggcggcggcccggcggcgggc
acgggcgcggggggcggcggcggcggctccggcgagcatcgccccagccgctccgggggg
gataactcgcttgacctcaccctcatcctcatcatcgccctgggctccgtctccttcatc
tttctgctggccatgatcgtcctggcggtgcgctgccagaaggagaagaagctcaatatc
tacacctgcctggccagcgactgctgcctgggctgctgctgctgctgcccctgctgcagc
cggcaggcgcgggcccgcaagaagaagctcagcaagtcggacatcatgctggtgcagagc
tccaacgtgccgagcaacccggcgcaggtgcctgtggaggagtcgggcagcttcggctcc
caccaccacaatcagaactactgctaccaagtctgcctcacccccgagtccgccaagacc
gacctgatgttcctcaagccctgtagcccctctcgcagcaccgacgccgagcacaacccc
tgtggggccatcgtcaccggctacgccgaccagcagcccgacatcatctccaacggcagc
attttgtccagcgagacaaaacaccagcgtgctgagctcagttatctagttgacagaccc
cgacgagtaaacagttctgcattccaggaagcagacatagtaagctctaaggacagtggt
catggagacagcgagcaaggagacagtgatcatgatgccactaatcgaggtcaatcctct
ggcatggatctcttctccaattgcacagaggagtgtaaagcactgggccactcagatcgg
tgctggatgccttcctttgttccatccgatggacgccaagctgcagattaccgcagcaat
ctgcacgtacctggcatggactccgttccagacactgaagtgtttgaaacaccagaagcc
cagcctggggcagaaaggtccttctccacctttggcaaagagaaggcccttcacaacagt
ctggataggaaggagttcgatggactgctgtctaatacacgagcgccttacaaaccacca
tatttgaaacatgggtggcagcagagtaatccccatcctacatcccccagccccagcccc
agccgtgtgtctcaccctttacctggatgcagcactacgaaggcacttgccatctctgga
tctcaaagtggattataa
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