Hirundo rustica (Barn swallow): 120752675
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Entry
120752675 CDS
T09369
Symbol
LRRTM1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
120752675 (LRRTM1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_NXF1-5
LRRNT
LRR_12
UL97
HemY_N
Motif
Other DBs
NCBI-GeneID:
120752675
NCBI-ProteinID:
XP_039920053
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Position
5:complement(3182471..3186246)
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AA seq
521 aa
AA seq
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MDFLLIGLCLNWLLRKPPGLILCTLGIFSKMLPAVNSGCPQLCRCEGRLLYCESLNLTEM
PRNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTL
SSNKITQLPNTTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCL
RRNKVTIVVNTLDWIWQLEKMDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTYIDSRVL
DSWKSLTSISLSANAWDCSRNVCALASWLSNFQGRYDSNLLCATPEYAQGEDVLDAVYAF
HLCEDNADPTSVNTFSPVTNNSEQTLGYGSATATYDVPEGDEDRTTYAVTITMPGENSEN
AVQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPAGLRQLRQCFVTQRRKQKQKQTMHQMA
AMSAQEYYVDYKPNHIEGALVIINEYGSCSCHQQPARECEV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttcttattggtctctgtttaaactggctgctgaggaagcccccggggttg
atattgtgtacgctgggtatcttttctaaaatgcttccagctgtgaatagtgggtgtcca
cagctctgtcggtgtgagggcaggcttttgtactgtgaatcactgaatctcacagagatg
cctcgcaacctgtcgggcatgatgggcttgtctctgcggtacaacagcctttcagagctg
catgatggacagttcacagggttaatgcagctcacgtggctctatctggatcacaatcac
atttgctcagtggaggggaatgcctttcaaaaattgcggcgagttaaagagctcaccctg
agttccaacaaaataacccaactgcccaacaccactttccgccccatgccaaacttgcgc
agtgtggatttatcatacaacaacctacagtctttggagcctgacctgttccacgggctg
agaaaactgacaactttgcacatgcggtcaaacgccatcaagttcgtgccagtgagaatt
tttcaggactgtcgcagcctgaagtttctggacataggatacaatcagttaaagagcctg
gctcgaaactcttttgcaggcttgttcaaactcactgagctgcacctcgagcacaatgac
ttggtgaaagtgaatttagcccattttcccaggctcatctccctgcactccctctgcttg
cgaaggaataaagttaccattgtagtaaacactttggactggatatggcaactcgaaaag
atggatctctccggcaacgaaatcgaatacatcgaacctcacgttttcgaaagtgtacct
catctcaaatccctgcagctggactccaaccggctgacctacatcgactcccgagtcctc
gactcctggaagtccctcacgagcatcagcctctctgccaatgcctgggattgcagccgg
aacgtctgcgccctggcctcctggctgagcaacttccagggtcgctacgacagcaacctg
ctctgtgccacccctgagtacgcccagggagaggatgttttggacgccgtctacgccttt
cacttgtgcgaggacaacgccgaccccacaagcgtcaacaccttctccccggtgaccaac
aacagcgagcagactctcggctatggctcggccaccgccacctacgacgtgcccgagggc
gacgaggaccggaccacgtacgccgtcaccatcaccatgcccggcgagaactccgagaat
gccgtgcagattcacaaggtggtgacgggcaccatggcactgattttttccttcctcatc
gtggttttggtgttgtacgtctcctggaagtgcttcccagccggcttaaggcaactaaga
cagtgctttgtcacacagcgcaggaagcagaagcaaaaacagaccatgcaccaaatggct
gccatgtcagcccaggagtattatgttgattacaaacccaaccacattgagggagccctg
gtgatcattaatgagtacggatcttgttcctgtcaccagcagccagcgagggaatgcgag
gtgtga
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