Hirundo rustica (Barn swallow): 120752715
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Entry
120752715 CDS
T09369
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120752715 (SH3TC1)
Membrane trafficking [BR:
hrt04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120752715 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_10
TPR_1
ARM_TT21
ARM_TT21_4th
ARM_TT21_C
SH3_1
HAT_Syf1_CNRKL1_C
SH3_2
Csd3_N
TPR_19
TPR_16
ANAPC3
Motif
Other DBs
NCBI-GeneID:
120752715
NCBI-ProteinID:
XP_039920147
LinkDB
All DBs
Position
5:complement(10140783..10181172)
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AA seq
1334 aa
AA seq
DB search
MESLAVAAGTSMLSTNTAVPALEGEQDRNLERAETEQGVCECDCKHAGSNAATSTLRDGV
GMDTMQEQMECSPSEKCMNVSSRTLPSQAENFPTDISLKLTMVKRKSGCPDPRLQRQLRG
QLRLLENDSKEVMTVFSELSARLLSIHSDQDLIVVTFKTFEEIWKFLTYHSLGFINHCME
NLFLDQSFWLYTQEEEDTGIEVCINEKSLNLMYRSLLVQEGSFFVLYPDNAIQKVMVTDN
GTTYFETGAFTEDVTGGSLESDMLMWSNASLEPLEPFHQWFLKGYSNPVDFSHKNESKPI
RKVAMGSCLAVMNYESIVLEELSFQEGDKIEILGYFIECMEWFLGRHVFTGQIGFVKTGH
VKLDLSRNNELLKPDLDFLEAEELSLFSKEKNLEEVVHLLKQTSITDVCSVYRIDELEEP
EFQKSHECEIPCSPSSPGSTSKNGKIEELLKNCFKNLEATQAEEPTAEGKESSGSSKTEI
FPLPEGPSFHVCQEDIQASEIFEPLLLFLNRKEYESNFKSLYDFSYSFTNSMFYGFSEEE
QLVSFLRLAREAAKKAGLSWALARLCFLLGRLSVKKLKFSQARVYFEEALRAVAGGFSDL
YFVIALYTNLTGIYLTQKNREKSTHIFDKAASLLVGIPNYICSADLESDILKYALKRTIL
SQNKRAEARACFLLAKHYSARKQHQEALPFLERFQLLLNDLGLQNSLSNNCYFKLAESYH
EKCLPHIVLSCIKVTSPQSSSTLMDSLKRIDLVIKNSPKLYGLRKLRQIFPSQIAPYLIQ
ALSSVFTNEEEGLCSTIYLSLAKLYSHHKQYGKAIAYMVKALDSASAKPEETVNYLVSLA
WLYILHKEYDVALAILNAVVGSAQSSPQQLGIAYNMLAIALKRKNNTKEAAESYYKALRL
SEETEMTHNQAIALANFGALCLHAAASKLAERYFIRAVKLFSKLPIMDCGQDFIQVLLQL
GCYYVSGTEREKGRFYYEWAFLVAMETSHLESQLQAIKLLCQFYSTVAPNETQCVIYNEY
QLSLARKMSNKVLEGQILETISQLYLSLGTERAYRSALEYTKRSLGIFIDLQKKEKEAYA
WLQAGKIYYVLRQNELVDLYIQVAQDAALCTGDPNLGMELFEAAGDIFFNGTWEKEKAVT
FYRDRALPLAVQTGNKTTELRLCNKLVELLMNLKAYEESLEYARVALIRSVNLGNQLNER
IAYHRLAVIHHHLGHCELAEHFYLKALSLCSSPLEFEEETLYYVKVYSVLGDIIFYDLKD
PFDAAGYYHLALAAAMDLGNKKAQLKIYTRLAVIYHNFLVDREMSLFFYQKARTFATELN
VRRINLAPDQRYKS
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggagagtttggcagtggcagctggcacatctatgctcagcactaacaccgctgtccct
gccctggagggagagcaagacaggaacttggagagggcagaaacagagcaaggagtgtgc
gagtgtgactgcaaacatgcagggagtaatgctgccaccagcactctcagggacggagtt
gggatggacacgatgcaagaacaaatggagtgttctccaagcgaaaaatgcatgaatgtc
agttcaaggacccttcccagtcaggcagagaattttccaactgatatctccttgaagtta
acaatggtgaaaagaaagagtggatgtcctgatcccaggctccaacgacagctcagaggg
cagctccgtcttctggaaaatgacagcaaggaggtgatgactgtcttcagtgagctttct
gccagactcctgtcaattcacagtgatcaagatttaatagtggtgacatttaaaactttt
gaagaaatatggaagtttctaacctaccactcactgggtttcataaatcattgcatggag
aacttattcctagaccaatctttctggctatatacccaagaggaggaagatacaggcatt
gaagtctgcataaatgaaaaatcattaaatttgatgtacagaagtctgctagtacaggaa
ggatctttttttgttttatatcctgataatgcaatacaaaaggtgatggttacagacaat
ggaacaacttattttgagactggggcttttactgaagatgtaacaggaggatctttggag
agtgacatgctcatgtggtctaatgcctctctggagccattggagcctttccatcaatgg
tttcttaaaggatattctaatcctgttgatttttcacataaaaatgaatctaaacccatc
agaaaagttgcaatgggatcctgtctagctgtaatgaattatgaaagtattgtgttggaa
gagctgagtttccaagaaggggacaaaattgagatccttggctacttcattgaatgcatg
gaatggtttcttggaagacatgtgtttactggccaaataggttttgtaaagacaggtcat
gttaagctggacttatctagaaataatgagctccttaagccagatctggattttcttgaa
gcagaagagctatctttattttcaaaagaaaagaatttggaagaagtcgtacatttgttg
aaacaaacctctatcacagatgtttgctctgtgtacagaatagatgagttagaagaacct
gaatttcagaaatctcatgaatgtgaaattccatgctcaccttctagcccgggatccact
agcaagaatggcaagatagaagaattgctgaagaactgctttaagaatctggaggccact
caagctgaggagccaactgctgaagggaaggaatcttctggttcttcaaagactgaaata
tttcctctacctgaagggccttctttccatgtatgtcaagaagacattcaagcatctgag
atctttgagccattgttactcttcttaaataggaaagaatatgagagcaacttcaaaagc
ctgtatgatttctcttattcatttaccaatagtatgttttatggattttcagaagaagaa
caactggttagttttttaagattagcaagggaagcagcaaagaaagcaggtctgtcctgg
gcacttgcaaggctgtgctttctcttaggcaggctcagtgtcaaaaagctgaagttttcc
caagctcgggtgtattttgaggaagcattgagagcagtagctggaggatttagtgatttg
tactttgtgattgctctttatacaaatctaacaggaatctacttgacccagaagaacaga
gaaaagtctactcatatttttgacaaggctgcatctcttctcgtgggaattcccaactac
atttgcagtgctgatctggagtcagacatactaaagtatgctctgaagaggacaattttg
agccagaacaaacgtgcagaggcaagagcgtgctttctgctggcaaaacattacagtgca
cgcaagcaacaccaagaggcactgccattcttggaaaggtttcagctgttgctcaatgat
ctgggtttacaaaacagtttatccaacaactgttacttcaaactggcagagtcctaccac
gaaaagtgtttgccacacattgtattaagttgcataaaggttacctctcctcagagctcc
agtaccttaatggattccctgaaaaggattgatttagtcatcaaaaattctcccaaacta
tatggcttgagaaaactcaggcaaatattcccatcccaaattgcaccttacctcatacaa
gcactttcctctgtgtttactaatgaggaggaaggactgtgcagcactatctatctcagc
ttagcaaagctgtacagccaccacaaacagtatggaaaagccattgcttacatggtgaaa
gcactggactctgcttctgctaagccagaggaaactgtcaactatttggtttcactcgct
tggctatacattcttcacaaggagtatgatgtggctttagccattttaaatgctgttgta
ggctctgcacagagcagtcctcagcagcttggcattgcttataacatgcttgccattgcg
ttgaaaaggaaaaacaacacaaaagaagctgctgagagctactacaaagcactgcgtctt
tcagaagagactgagatgacccataaccaagccatagccctggctaattttggggcactc
tgcctgcatgcagcagccagcaagctggcagaacgttattttatcagggcagtgaagcta
ttctccaagcttccaattatggactgtggtcaagactttatccaagtcctccttcagctg
ggttgttattacgttagtggaactgaaagagagaaaggaaggttttactatgaatgggct
tttttagttgcaatggagacaagtcacctggagagtcaactgcaagcaattaagctgctg
tgtcagttctacagtacagttgctcccaatgagactcagtgtgtcatctacaatgaatat
caactatctttagccagaaaaatgtccaacaaagttctggagggacaaattttggaaacc
attagtcagctgtatttgtctttaggaacagaaagggcctacaggtcagctctggaatat
accaaaagaagccttggaatatttatagatctccagaaaaaagagaaggaggcatatgct
tggctccaggcaggaaagatatactatgttctgaggcagaatgagcttgtggatctttat
attcaggttgctcaggatgctgctctttgcacaggagatccaaatttaggaatggaattg
tttgaagctgctggagacatatttttcaatggtacttgggaaaaggagaaagcagtgact
ttctacagggacagggctctcccacttgctgttcagactggcaacaaaaccactgaactc
aggttatgcaataagttggtggaactgctgatgaatctgaaggcttatgaggagagcctg
gaatatgcaagagtagctctcatccgcagcgtaaatttaggaaatcagctaaatgaaaga
atagcttaccatcgcctggcagtcatccatcaccatttgggtcactgtgaactagctgaa
cacttctatctaaaggccttgtccctctgttcatctcctttggagtttgaggaggaaaca
ctctattatgtcaaggtgtactcagtcttaggagatattatattctatgaccttaaggac
ccctttgatgcagcgggctattaccacttggcgcttgctgctgccatggacctgggcaat
aaaaaagctcaactgaagatttacaccagacttgctgtgatctaccataacttccttgtg
gatcgggaaatgtctctcttcttctaccaaaaggcaagaacctttgcaacagagctgaat
gtaaggagaataaatttagctcctgatcagcgttacaagagttga
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