Hirundo rustica (Barn swallow): 120752781 Help Entry 120752781         CDS       T09369                                  Symbol HELQ Name (RefSeq) helicase POLQ-like isoform X1   KO K19178   POLQ-like helicase [EC:5.6.2.4] Organism hrt  Hirundo rustica (Barn swallow) Brite KEGG Orthology (KO) [BR:hrt00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:hrt03400]     120752781 (HELQ) Enzymes [BR:hrt01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      120752781 (HELQ) DNA repair and recombination proteins [BR:hrt03400]  Eukaryotic type   Other factors with a suspected DNA repair function    Helicases     120752781 (HELQ) SSDB OrthologParalogGFIT Motif Pfam:  POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF7898 DUF4332 DNA_pol_lambd_f RIMB1_N DGKD_4H Sll0103_C DUF3135 Cdd1 Motif Other DBs NCBI-GeneID:  120752781 NCBI-ProteinID:  XP_039920299 LinkDB All DBs Position 5:60008749..60022459 Genome browser AA seq 1053 aa AA seqDB search MAEPRLAVRRKSRSSSERKRSRAAVQPIAASSPVARKRPSPGGEGAPAEAPCANDSEEDM FGDYDSFYGNDSLMAQVDDIEHKYLQDENTDVKAAGEIVLGNLPSGVHQKGRDNSSASEN VVALESDKEGARQRRDSDPADGNQELPESILDDLPSSQLLYFEKMDELSSAPRTSPVSKG RDERVNSSSDKIRDPLSFYAGAEHGNRPADSSSHSKCVLFKTESLKDHLKSAMTGNARAQ TLQVSKTKQLKEAVLSEEMFVARKVIESSSVDIGPFYGLPSKVKDLFRQLRGIETLYEWQ HDCLMLESLQQRRNLIYSLPTGGGKTLVAEIIILQELLCRQKDVLMILPYVAIVQEKVRG LSSFGIELGFLVEEYAGSKGRFPPVKRRVKKSLYIATIEKGHTLVNSLIETERIYDLGLV VVDELHMLGEGSRGAILEITLAKILYTSKKTQIIGMSATLNNVGDLQKFLQAEYYTNDFR PVELKEYIKVRDTIYAVDSKTENGFAFSRLLNFKYSSNLEKADPDHIIALVTEVIPKYSC LIFCPTKKNCENVASMVCKYLKKEFRAHKEKEKQDLIKSLKSIGNGAVCPVLKQTIPFGI AYHHSGLTNDERKSIEEAYSSGVLCLLACTATLAAGVNLPARRVILRAPYVGNDFLKKNQ YKQMIGRAGRAGIDSAGESILIVQEKDKHLVQDLVHSPLENCYSNLLLELTKGMQSLLLS LVGLKIAVTHEEVDRFMCCTLLGVQQQLMSEEKSLSEIIKDGLANLIEKGLLKGKISEKD HNSKSTLTITPLGKATYKGSIDLAYCNLLYRELKKGLEGLVLESNLHLLYLSTPYDMTST CSPNWMIYLRQFNQLSAAEQKVAEIVGVPESFITKKASGQAIRKNVDNAVVNRLYLTFVL YALLKETNVWSVSEKFNMSRGYVQNLLNSAASFASCLLHFCEELEEFWVYKALLTELTKQ LTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTLAHLANANPETLVRMIEHLSRRQAKQI VSSAKMLLSEKAEALQEEVEELLKVPADIPGTH NT seq 3162 nt NT seq  +upstreamnt  +downstreamnt atggcggagcccaggctcgccgtgcggaggaagagccgctccagctcggagcgcaagcgg agccgggccgcggtgcagcccatcgccgccagctcgccggtggctcgcaagagaccgagc cctggcggcgagggagccccggcggaggctccgtgcgctaacgacagcgaggaggatatg tttggggactacgacagcttttatggaaacgattcattgatggctcaagtggatgatatt gaacacaaatacctgcaggatgaaaatacggatgtgaaagcagctggagagatcgtactt gggaacctcccgtcaggagttcaccagaaagggcgagataactcttctgcttccgaaaat gtggttgcccttgaaagtgacaaagagggtgctcgccaaaggcgtgacagtgacccagct gatggcaatcaggaattacctgagtccattttagatgacttgccatcgtcacaacttctg tattttgaaaaaatggatgaactttcttctgctcctagaacatctccagtctcaaaaggg agggatgaacgtgtgaattcttcttcagacaaaatcagggaccctttgtctttttatgct ggtgctgagcacgggaacaggcctgctgactcttcctcacattccaagtgtgttttattt aaaactgagagtctcaaagatcacctgaaaagtgctatgactggaaatgccagagcccag actctgcaggtgtccaagaccaagcagctcaaagaagctgttttatccgaagagatgttt gtggctaggaaagttattgagtcttcttctgttgatataggccctttttatggattacct agcaaggttaaagatttattcagacaacttcgagggattgaaacactttatgagtggcag catgattgcttaatgctagaatccctgcagcaaaggaggaatctgatctactcattgcca actggtggtggaaaaactcttgtagctgaaataataattctccaagagttactgtgcagg cagaaggatgttctgatgatcctgccctatgtcgccattgtccaggaaaaggttaggggt ttatcgagttttgggatagaattgggtttcctggttgaagaatatgcaggaagtaaagga cgatttccaccggtcaaaaggagagtaaaaaaatctctttatattgctactatagaaaaa ggacacactctggtgaactccttaattgaaacagaaagaatctatgacctcggcctggtt gtggttgatgagttgcatatgctcggggagggaagtcgtggagcaatactggaaattact ctggcgaaaatcctttacaccagtaaaaagacacagatcattggcatgagtgcaacgtta aataatgttggagacctgcagaagttcctgcaagcagagtactacacgaatgattttaga ccggtagaattaaaggaatacataaaggtgcgagacaccatttatgcagttgacagcaaa acagaaaatggctttgctttttcacgtctccttaatttcaagtattctagtaatctggag aaagcagatcctgaccacatcattgcattggttactgaagttattcctaaatattcctgc ctaatcttttgtcccactaaaaagaactgtgaaaatgtggcttcaatggtgtgcaagtac ctcaagaaagaatttagagctcacaaggagaaagaaaaacaagatctcatcaagagccta aagagtattggaaatggagctgtctgtcctgttctgaagcaaacaatcccttttggtatt gcctatcaccatagtggccttacaaatgatgaaagaaaaagcatagaggaagcttattct tcaggtgtcctgtgtctgcttgcttgcacagccactctagctgctggagtcaacctgcca gctagaagggtgattctcagagctccttatgttggcaatgacttcctgaagaagaaccag tacaaacaaatgattggcagagctggtcgagctggtattgacagtgctggagaaagcatt ctcatcgtgcaagaaaaagacaaacacttggttcaggatttagttcacagtcctttggag aattgctacagcaatctcctgctggagttgaccaagggaatgcagagcctgttgttgtct ttggttggactgaagatagcagttacccatgaggaagtggaccgttttatgtgctgtaca ttgctgggtgttcagcagcagctgatgtctgaagagaagagcctctcagagataattaaa gatgggctggcaaatctaatagaaaaaggactcctgaaagggaaaatatctgagaaggac cacaattccaaatctaccctgacaatcacacccttgggtaaagctacatataagggctca atagacttggcatactgcaatcttctgtacagggaattaaagaagggtttggaggggctg gttctcgagagcaatcttcatctcctgtatctgtcgactccctatgatatgacttctacc tgtagcccaaattggatgatttacttgagacagttcaaccagctaagtgcagcagagcaa aaagtagcagagattgtgggagtacctgaaagctttattacaaaaaaggcttctggtcaa gccatcagaaagaatgtggacaatgctgtggtgaacaggctctacctgacgtttgtcctc tacgccctgctgaaagagaccaatgtatggagtgtttcagagaaatttaacatgtcccgg ggctatgtgcaaaatctcctcaattctgctgcctcctttgcatcctgccttctacatttc tgtgaggaattggaagaattctgggtttataaagccttgctgacagaacttaccaagcag ttgacatactgtgttaagacagaactcatccctctgatggaggtagcaggggttctagag gcacgagcaaaacagctttacaatgcagggtacaaaactttagcacacttggctaatgca aatccagaaactctggtgaggatgattgagcacttgtcacgacgtcaagccaaacaaatc gtttcatctgcaaagatgctgctgagcgaaaaagctgaggctttacaggaagaagtcgaa gaactcctaaaagtgccagcagatatcccagggacccactga

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