Hirundo rustica (Barn swallow): 120752794
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Entry
120752794 CDS
T09369
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04010
MAPK signaling pathway
hrt04210
Apoptosis
hrt04218
Cellular senescence
hrt04620
Toll-like receptor signaling pathway
hrt04621
NOD-like receptor signaling pathway
hrt04622
RIG-I-like receptor signaling pathway
hrt04623
Cytosolic DNA-sensing pathway
hrt04625
C-type lectin receptor signaling pathway
hrt04920
Adipocytokine signaling pathway
hrt05132
Salmonella infection
hrt05164
Influenza A
hrt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120752794 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120752794 (NFKB1)
04218 Cellular senescence
120752794 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120752794 (NFKB1)
04621 NOD-like receptor signaling pathway
120752794 (NFKB1)
04622 RIG-I-like receptor signaling pathway
120752794 (NFKB1)
04623 Cytosolic DNA-sensing pathway
120752794 (NFKB1)
04625 C-type lectin receptor signaling pathway
120752794 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
120752794 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
120752794 (NFKB1)
05168 Herpes simplex virus 1 infection
120752794 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
120752794 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120752794 (NFKB1)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120752794 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
120752794
NCBI-ProteinID:
XP_039920333
LinkDB
All DBs
Position
5:complement(48981497..49039222)
Genome browser
AA seq
982 aa
AA seq
DB search
MAEDSYIMGVSDPQMFAVDQFMGMNALFNSTNYITSDLPLRTADGPYLQIIEQPKQRGFR
FRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVGK
FCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPELG
YLQAEGCGDRQLTEREREIIRQAAIQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVIS
DAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWEG
FGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDK
EEVQRKRQKLMPNFSDGYGGGSGTGGGGMYGGAGGSAGSGFSFPSYGYSAFGGMHFHPGT
TKSSAGMKHEGLSNCTAEQDRKSCDKQSDKWDVKRDVKVETVERTECRTSALNEKKEDSV
SSCKTEVNEADCRWQGALFLEKAMQLAKRHCNALFDYAVTGDVKMLLAAQRHLTAVQDEN
GDNVLHLAIIHLHTELVKNLLEVMPDLNYNSIINMRNDLYQTPLHLAVITKQAKVVEDLL
RAGADVSLLDRHGNSVLHLAATEGDDKILGLLLRHEKVSPMVNLPNGEGLSAIHMVVMAN
SLSCLKQLIAARVNVNAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDDVKDDEDDDEGIVPGTTPLDMAANC
EVYDILNGKPYESAEVLEDLLTQGHLRELNENSKMQLYKLLEVPDPTKNWSTLAQKLGLG
ILNNAFRLSPSPSKTLLDNYEVSGGTVQELITALRQMDHTEAIKIIQEALSIPHRPSSLE
DSTAKTLPSSPLTFANGETGELYNSRFQDTESTCDSGVETSFRKLSFTYSDSLNSKPPLT
LGKTALGYGQESSGQSNYIADE
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagattcctatattatgggagtatctgatccccaaatgtttgcagtggatcag
ttcatgggaatgaatgctttatttaatagtacaaattacatcacttcagacttaccacta
cgaacagcagatggaccgtatcttcaaatcatagaacagccaaaacagaggggatttcgt
ttccgatacgtgtgtgaagggccttcgcacggtggacttccaggtgcttctagtgaaaag
aacaaaaaatcataccctcaggtcaaaatctgcaattatgttggacctgcgaaagtaatt
gtccagttagtaactaatgggaaatacgtccacttacacgcccacagcttggtggggaaa
ttctgcgaagatggggtgtgcacggttaacgcaggacctaaggacatggttgtagggttt
gcaaatcttggaatacttcatgtcacgaagaagaaagtgtttgaaactctggaaacgcgc
atgatagatgcttgcaagaagggatacaacccgggactcctggtgcatccggaactcggc
tatctgcaggcagaaggatgtggagacaggcagctaactgagcgggagagagaaatcatc
cgccaggcagccatacagcagaccaaggagatggatctcagcgtggtgcggctcatgttc
acagcctttcttcccgacagcaacggcagcttcacacgcaagcttgatcccgttatatca
gatgcaatatatgacagcaaagctcccaatgcctccaacctaaaaattgtaagaatggac
agaacagcagggtgtgtgacaggaggggaagagatctacctgctctgtgacaaggttcag
aaagatgatattcaaatacgtttctatgaagaggatgagaatggtggtatgtgggaaggc
tttggagatttttctcctacagatgtacacagacagtttgctattgtgttcaaaacaccc
aagtaccgagatgtcaatatcacaaagccagcatctgtatttgtacaactgcggaggaaa
tctgatctagaaacaagcgaaccaaagccttttctctactatccggaaatcaaagataaa
gaagaagtgcaaaggaaacgacagaagctcatgcccaacttctctgatggctatggtgga
ggcagtggcactggaggtggtggcatgtatggaggggcaggtggcagtgctggctctggg
ttcagttttccttcatatggatactctgcttttggagggatgcatttccatcctggcaca
acaaagtccagtgctggcatgaaacacgaaggtctatcgaattgcacagctgaacaagac
agaaagagctgcgataaacaaagtgacaaatgggacgtgaaacgtgatgtgaaggtggaa
accgtggagaggactgagtgcagaacatctgctcttaatgagaaaaaggaggattctgtt
tcttcctgtaaaactgaagtaaacgaagcagattgcaggtggcagggtgctctgttcctg
gagaaggccatgcagctcgccaagcgccactgcaacgctctcttcgattacgccgtaact
ggagacgtgaagatgctgttggcagctcagcgccatctcaccgctgtccaggatgaaaat
ggggacaatgtccttcatttagcaattatccaccttcatactgagctggtgaaaaacctc
ttggaagttatgcccgatctgaattacaacagcatcattaacatgagaaatgacctctat
cagactcccctgcacctggcagtaatcacaaagcaggcaaaggtggtggaagatttgctg
agggctggagcggatgtcagccttctggatcgccacggcaattccgtcttacatttagct
gctactgaaggagatgacaagattttgggtctactcctcaggcatgagaaggtatctcca
atggtcaacctccccaatggtgaaggtctcagtgcaattcacatggtggtgatggcaaat
agcctgtcctgcctcaaacagctgattgctgctagagttaacgtcaatgctcaggaacaa
aaatctggacgaactgcattgcatttggctgttgaacaagagaacatccccttggcaggc
tgccttttgcttgagggtgatgctgatgtggacagcactacatatgatgggacaactccg
cttcacatagcagctggaaggggctcaacaaaattggcagcagttctcaaagcagcaggt
gcaaatcctcacattgagaactttgagcctttgtttgatctagatgatgtgaaagatgat
gaagatgatgatgaagggattgtacctggaacaacaccactggatatggcagctaactgt
gaggtgtatgacatattaaatggcaagccctacgagtcagcagaggttttggaggactta
ctcacacaaggacatttgagagagctgaatgagaattcgaagatgcagctttacaaacta
ttagaagtgcctgatccaactaaaaactggtccaccctagcacaaaaactgggtcttggc
atacttaataatgccttcaggttgagcccttccccatcaaagactctgctagataattat
gaggtttctggtggtacagttcaagagctgatcactgctttgagacagatggatcacaca
gaagccataaaaataattcaggaagcactatccatcccacacagaccatcttccctggag
gacagtacagcaaaaactcttccatcatcaccgctcacctttgcaaatggagagacaggt
gagctctacaatagcagatttcaagacaccgaaagcacgtgtgacagcggtgtggagacc
tccttccgcaagctgagcttcacttactcagactctctgaacagcaaacccccactaaca
ctgggcaaaacggccctgggctacggacaggaaagttcagggcaaagcaattatatagct
gacgagtga
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