Hirundo rustica (Barn swallow): 120752814
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Entry
120752814 CDS
T09369
Symbol
RAB11FIP5
Name
(RefSeq) LOW QUALITY PROTEIN: rab11 family-interacting protein 5
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120752814 (RAB11FIP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120752814 (RAB11FIP5)
Membrane trafficking [BR:
hrt04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120752814 (RAB11FIP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
120752814
NCBI-ProteinID:
XP_039920388
LinkDB
All DBs
Position
5:complement(864963..911433)
Genome browser
AA seq
1444 aa
AA seq
DB search
MALLRAAALPAEGCPAWLPTHVQVTVVRARGLRCKGGGGGKGKAGGSDAYTVIQLGREKY
STSVAEKSGGSPEWREECAFELPPEPGACGGLVLTVMHRALVGMDRFLGQALVPLEPARQ
RGREPDERWHKLHSKAGKKEKERGEILVSIQFTRNSLTASMFDLSMKDKPRSPFGKLKDK
VTGKKKYDLESASAIIPSSLGALDVEDDFELGGKKSKVKGFFLKNKLRKSSLTQSNTSLG
SDSTVSSASLSLAANAPEGTKSPSRHGSLTTERSVRDLLPSPKLTHKRAFSDDVSQASPV
PEAKAAPSPGPKQEPASRSSLCINGSHVYGEEPALRNPAGSAPVPVPVPALPRRHDEAFG
FAPLHPDPQDAPRGLGGLERAQQRDEPRFIPSPPSLALQEELKVSTKAVTLSNHLGRARM
EESNRLESKAGQAAPPPGFPAEPKDGAPQDSAKEDKRAKGGFFHHGGTRSDAGDRGTPVH
ASAAGDERSKSSGWFGSKEARESPQKPSFPPGPRAAPEVAGSFYSSEDCSPSASPRQADP
EREPPAQSVGVPVPETTPPAPGELPPAASDPAVPPLPSEWDETFDAFATSRLKPERKKED
FFASVAAEGMAFIDDPDRASPTERSAQPPCRKGSKAFEEAESPMGAEIPAALRSWTNFSS
LDVGANLVSTTQEATVIEDVLSPVSAGSVAGRRKSSTPTVWTAAFASGNPGDKEAPPALS
AENRAREEGDSGEEESCSAGTNGWMTIATETAADPSESAPSAAEEREGAFGPRPPFLAEG
AFEAPSSCAATRVFPGARCPPEAPAGSTAAAVSPRALGDVAARSFPEAGAEPGGGREDAS
DIRSSVFRLQASMRLRASDGLLQLGSDIAERRAVPSPSPSPWEAHRGRQEPAAPPPKPPR
WFAAALGDGEEGEPGGTQRGTQGRWEDSEGPGAEMGSPKRRGSSEPSVPAPPSLPAPRAD
AAEAESEFPVPEGAGAAGVDSAAALETGASELGTGDASVGEHPSEVNEMDVAEQFESCTS
KFSLDGLEQSGAEESWSQPRLSPRMQGAADSARWETACKQELFPEELSISGLDPPSKLAP
GQPASWTALEEQEAAGRPHPRPQRSEHGESPSQLELACQDGEGPAGEQPEACAPPEEAEQ
GSAPASEEPQGHSAESRIDFKKADFWKPDRAEERHAQGALRNPFTLALSPNSPSNPFVEK
PPAPLPIRAVLPEKLEQGDFSFLSLQEEAPGHGLQPTNATPLHASPPLAFSTPFLVAATN
PEPCGRPRSPAGVPASPAAARPRPQRGDAQASALLVLPRETRPAEKPLCQQTSSPHPVKP
LSAVQEGSSERKQQHRASLSSALSNGLERLKMVTTSNVQPVAPASHPDKSDPKLKDPAQP
DQSAKYYHLTHHELIQLLLQKEAELSKKEEHIRELENYIDQLLVRIMEQSPTLLQIPLGG
GQAP
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctgcgggcggccgcgctccccgccgagggctgcccggcctggctgcccacg
cacgtccaggtgacggtggtgcgggcccgcgggctgcgctgcaagggcggcggcggcggc
aaaggcaaagcgggcggcagcgacgcctacaccgtgatccagctgggccgcgagaagtac
agcacctcggtggccgagaagagcggcggcagccccgagtggagggaggaatgcgccttc
gagctgccccccgagcccggggcctgcggcgggctggtgctcaccgtgatgcaccgggcg
ctggtgggcatggaccggttcctgggccaggccctggtgcccctggagcccgcccggcag
cgcggccgcgagcccgacgagcggtggcacaagctgcactccaaggctgggaagaaggag
aaggagcgcggtgagatcctggtgagcatccagttcacgcggaacagcctcaccgccagc
atgttcgacctgtccatgaaggacaagccgcgctcgcccttcgggaagctcaaggacaag
gtgacaggcaagaagaagtacgacctggagtcggcctctgccatcatccccagcagcctg
ggggccctggacgtggaggatgacttcgagctcgggggcaagaagtccaaagtcaagggc
ttcttcctgaagaacaagctgcgcaaatcgtcgctgacgcagtccaacacctccctgggc
tccgacagcaccgtctcctctgccagcctgagcctggcagccaatgcccccgaggggacc
aaatcccccagcagacacggcagtctgaccaccgagcgctctgtgagagacctgctgccc
tccccgaagctgacccacaagcgagccttcagcgacgacgtgtcccaggccagcccggtg
ccggaggccaaggccgcgccgagccccggcccgaagcaggagcccgcgtcccgctcctcg
ctgtgcatcaacggcagccacgtgtacggggaggagccggccctcaggaaccccgccggc
tcggcccccgtgcccgtgcccgtgcccgccctgccccgcaggcacgacgaggcgttcggc
ttcgcccccctgcaccccgaccctcaggacgcgccccgggggctgggcggcctggagagg
gcccagcagagggacgagccccgcttcatcccgtcccctcccagcctggccctgcaggag
gagctcaaggtgtccaccaaggccgtgaccctcagcaaccacctgggccgggccaggatg
gaggagagcaatcgcctggagagcaaagccggccaggccgcgcctccgccgggcttcccc
gcggagcccaaggacggagcgccccaggacagcgccaaggaggacaagagagccaaggga
ggcttcttccaccacgggggcaccaggagtgacgcgggggacagagggacccccgtccac
gcctcggctgcgggggatgagaggagtaagagcagcggctggtttgggtccaaggaggcc
agagagtcccctcagaaacccagtttcccgcctgggccgcgtgctgcaccagaggtcgct
gggagcttttattcctctgaggattgcagtccctctgcctccccaaggcaggcagacccc
gagagggagcctccagcccaaagcgttggcgtccccgtgccagaaaccactcccccagca
ccgggagagctccctcctgccgccagcgaccccgccgtccccccgctgccctcggagtgg
gacgagaccttcgatgcctttgccaccagcaggctcaaacccgagcggaagaaggaggac
ttctttgcctcggtggcagcggagggcatggctttcattgatgaccccgacagagccagc
ccgaccgagcgctctgcccagccgccctgccggaagggctccaaagcgttcgaagaggcc
gagtcgcccatgggcgctgaaatccccgcagctctccgctcttggacaaatttctccagt
ctagacgtgggggccaacctggtgagcaccacccaggaggccacggtgatcgaggatgtg
ctgagccccgtgtccgccggctccgtggccgggaggaggaaaagcagcacgcccacggtc
tggacagccgcgtttgcctcgggcaaccccggggacaaagaggcgccaccagctctgagc
gctgaaaatcgcgccagggaggaaggggacagcggtgaggaggagtcctgcagcgcaggg
accaacggctggatgaccatagccacggaaaccgccgctgacccctctgagagcgccccg
agcgcggccgaggagcgcgagggcgccttcggcccgcgcccgcccttcctggccgagggc
gccttcgaagccccttcatcctgtgctgccacccgcgtgttcccaggagctcgctgcccc
cccgaggccccggccggcagcaccgcggcggccgtgtccccgcgggcgctcggggacgtg
gcagcgcggagcttccccgaggcgggcgcggagcccggcggcggccgggaggacgcctcg
gacatccgcagctcggtgttccggctgcaggccagcatgaggctgcgggccagcgacggc
ctcctgcagctcggctccgacatcgctgagcggcgcgcggtgccgtccccgtccccgtcc
ccgtgggaggcacaccggggccgccaggagccggccgcgccgccccccaaaccccccagg
tggttcgcggccgccctgggggatggcgaggagggagagcccggtggcacccagcgaggc
acgcaggggcggtgggaggactcagagggccctggagcggagatgggatcgccaaagcgc
cgtgggagcagcgagccctcggtgccggcgcctcccagcctgcccgcaccgcgagcggac
gccgctgaagccgagagtgagttcccagtgcccgagggggccggggctgccggtgtggac
tcggcagctgccttggagacaggagccagcgagctggggacaggggacgcctctgtgggg
gagcacccgtcagaggtgaacgagatggacgtggccgagcagtttgagagctgcacatcc
aagttctccctggatggactggagcagtcgggtgctgaggagagctggagccagccccgt
ttatcccctcggatgcagggggccgcagacagtgccaggtgggaaacagcctgcaaacag
gagctgttccctgaggagctcagtatttcgggacttgacccaccttccaagctagccccg
ggccagccggccagctggacggctctggaagagcaggaggcagccgggcgtccacaccca
cggccccaaaggtcagaacatggggagagcccatcccagctggagctggcatgccaggat
ggcgaggggccagcaggagagcagcccgaggcctgcgcccctcccgaggaggcagagcag
ggcagtgcccccgccagcgaggagccccaggggcactcggcagagagcaggatagacttc
aagaaagccgatttctggaaaccagatagggcagaggagaggcacgcacagggagccctg
aggaatcccttcaccctggcgctgagccccaattccccgagcaatcccttcgtggagaag
cccccagcccctctccccatccgagctgtgctgcccgaaaagcttgagcagggcgacttc
agcttcctcagcctgcaggaggaagcccccgggcacggcttgcagcccactaacgctacc
cccctgcatgccagcccgcccctggccttctccacccctttcctcgtggctgccactaac
cctgagccctgtggccgcccccggagccccgcgggggtccccgccagccccgccgccgcc
cggccgcgcccgcagcgcggggacgcacaagcttcagcgctcctggttctgcccagggag
acacggccggctgagaagcccctgtgccagcagacgtccagcccccaccccgtgaagccc
ctgagtgctgtgcaggagggctccagcgagaggaagcagcagcacagggccagcctgagc
tcggcgctgagcaatggcctggagaggctgaagatggtgaccacgagcaacgtccagccc
gtggccccggcctcccacccggacaaatccgaccccaagttaaaggaccccgcccagccc
gaccagtcggccaagtattaccacctgacccaccacgagctgatccagctgctgctgcag
aaggaggccgagctgagcaagaaggaggagcacatccgggagctggagaactacatcgac
cagctgctggtgcgcatcatggagcagtcccccacgctgctgcagatccccctgggcggg
ggccaggccccctga
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