Hirundo rustica (Barn swallow): 120753004
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Entry
120753004 CDS
T09369
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
120753004 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120753004 (CNGA1)
Ion channels [BR:
hrt04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120753004 (CNGA1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
CDC45
Sec62
Connexin
SlyX
Motif
Other DBs
NCBI-GeneID:
120753004
NCBI-ProteinID:
XP_058276666
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All DBs
Position
5:complement(25775590..25784947)
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AA seq
645 aa
AA seq
DB search
MKVGVIETHQSHTAVPSVVVHDTSKDLGLMHKGENRQQCLPGVFACYNINNNSNKDEEEK
KRKKEKKSKPEKKKDGETQKNKDKKEKNKSKDKLKKKENIEVKKKDIFTIDPAGNIYYNW
LFCITMPVMYNWTMIIARACFDELQHDYLVAWFIIDYVSDAIYVADMFVRTRTGYLEQGL
LVKEEQKLREKYKKSFQFKLDFLSIIPTDLLYFKLGLNYPELRINRLLRVARMFEFFQRT
ETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSDPEFARLTRK
YVYSLYWSTLTLTTIGETPPPVRDSEYFFVVVDFLVGVLIFATIVGNVGSMISNMNAARA
EFQAKIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAIN
VHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLAVVA
DDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEY
PDAKAMLEEKGKQILMKDGLLDIEIANLGSDPKDLEEKVAYMERAMDRLQTKFARLLAEY
EGAQQKVKKRLTQIEKILKPVIEEEFADLEEADPSTDKPGLSKAE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagtgattgagacccatcagtcccatacggctgttcccagtgtggtagtg
catgacaccagtaaggaccttggactgatgcacaaaggggaaaacaggcaacaatgtcta
cctggagtatttgcatgctacaatatcaacaacaatagtaataaagatgaagaggagaag
aaaaggaaaaaagaaaagaagagcaagccagaaaaaaaaaaggatggagaaacacaaaag
aacaaagataaaaaggagaaaaataaaagtaaagataagttgaagaagaaagaaaatata
gaagtgaagaagaaagatattttcaccattgatccagcaggaaatatttattacaactgg
ttgttttgcatcacaatgcctgtgatgtacaactggaccatgattattgctagagcctgt
tttgatgagcttcagcatgattacttagtggcatggtttattattgattatgtttctgat
gccatttatgttgctgatatgtttgtacggacaaggacaggttacctggagcaaggtctt
ctggtgaaagaagaacaaaagctacgagagaaatacaagaaatcttttcaattcaaacta
gattttctgtcaatcataccaactgatctcttatactttaagttaggattgaattaccca
gaattaagaataaacagactactcagagtagctcggatgtttgaattcttccagagaaca
gaaacaagaacaaattacccaaatatcttcaggatctccaaccttgtcatgtacattgtg
attattattcactggaacgcctgtgtgtactactctatctcaaaagccattggatttggg
gctgatacatgggtctaccccaacacctcagatcctgaatttgcccgcctgacaagaaag
tatgtctacagtctctactggtcaacactgaccctgactactatcggtgaaacgccccct
cctgtaagagattctgagtatttctttgtggttgttgacttcttggttggagtactgatc
ttcgctaccattgttggtaacgtgggctcaatgatctccaacatgaatgctgccagggcg
gagtttcaagcaaagattgacgctatcaagcagtatatgcactttcggaatgtgagtaag
gacatggaaaaaagagttataaagtggtttgactacctgtggacaaacaaaaaggctgtg
gatgaaagagaagtcttgaagtatctgccagataaactaagagcagagattgcaatcaac
gttcacctggaaacgctaaaaaaagttaggatttttgcagactgtgaagctggtctgctg
gttgaactggttttgaaactccagccccaagtatacagtcctggagattatatttgcaga
aaaggagatattggacgagagatgtacattattaaagaaggcaagctggcagtagttgct
gatgatggaattacacaatttgtggtcttaagtgatggcagctacttcggagaaatcagc
attcttaatatcaagggtagcaaagctggcaatcgaagaacagccaatattaaaagtatt
ggatactcagacttgttttgtctgtctaaagatgatctcatggaagctttaacagagtat
ccagatgcaaaggctatgctggaagaaaaaggcaagcaaatcctaatgaaagatgggttg
ctggacattgaaattgcaaatttaggaagtgatcctaaagatcttgaagagaaggttgcc
tacatggaacgtgctatggacaggttacaaaccaagtttgccaggttgttggctgagtat
gaaggtgcacagcagaaagtgaaaaaaagacttacacaaatagagaaaatattgaagcca
gttatagaggaagagtttgcagacttagaagaagcagatccatccacagataaacctgga
ttgtcaaaagcagaataa
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