Hirundo rustica (Barn swallow): 120753015
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Entry
120753015 CDS
T09369
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120753015 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120753015 (DROSHA)
03009 Ribosome biogenesis [BR:
hrt03009
]
120753015 (DROSHA)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120753015 (DROSHA)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
120753015 (DROSHA)
Messenger RNA biogenesis [BR:
hrt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
120753015 (DROSHA)
Ribosome biogenesis [BR:
hrt03009
]
Eukaryotic type
90S particles
RNase
120753015 (DROSHA)
Prokaryotic type
rRNA processing factors
120753015 (DROSHA)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
120753015 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
120753015
NCBI-ProteinID:
XP_039920806
LinkDB
All DBs
Position
1:complement(83175946..83249339)
Genome browser
AA seq
1336 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSTQTYRPQNLRQLHPQQPSVQYQYEQQTAPPTTYSSPPTT
GYMPPRPDFVPYPPPVPPSTQNPISQCPMRPPFPNHQMRQSFPVPPCFPPTPPPVPNPSN
TPVAGTPAGQSTFPYMMPPPTVPHPPPPPVMPQQVSYQPVYSAGYSQQSFPPPSFNSYQH
SSGSFPSSAASGSAGSSHFRHAGQYQGEKSQSDRRSPDRSKHYDEHRHREHGHIHGDRHR
SASHGDRRDRGRSPDRRRQESSRHRADYDRGRMSPHHRSYERNRERERERHRHRDSRRSP
SPDRSYKKDYKRAGSRSPSRERKRTRWEEDRERWSENQSSNKEKNYTAVKDKESEENASE
KNEEEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFDEELGKRQAK
AKAARPPWEPPKTKLDEDLESSSESECDSEDDSSCSSSSDSDVIDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSSYLFKDILELYDWNLKGPSLENDSVSCPRYHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
SQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHVRYHQCLMH
LDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHIHMR
KKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLAT
YRTAIVQNQHLAMLAKKLELERFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNEKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEFAITNDKTKRPVTLRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKELRWE
REHQERESEETEEARK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctgggcgaggatgtccccgtggccaggggggaccaggagcaagaact
tcgacccagacgtaccgccctcagaacctccggcagcttcacccgcagcagccctccgtg
cagtaccagtatgagcagcaaactgcccccccaacaacctactccagccctccaaccact
ggttacatgcctcccaggccagacttcgtgccctatcctcctccagtgcccccttccaca
caaaatcccatcagccagtgtcccatgaggccaccatttccgaaccaccagatgaggcag
agcttcccagtgcctccgtgtttccctcccactcctccgccggtgccgaatcctagcaac
actcccgtggcaggaacacctgctggacagagcacctttccttacatgatgcctcccccc
acagtaccgcaccctcccccgccgccagtcatgccccagcaggtcagctaccagcccgtg
tactcggcggggtactcgcagcagtcgttcccgccgcccagcttcaacagctaccagcac
agctccggctccttcccgagcagcgctgccagcggcagcgccggcagcagccacttccgg
cacgcggggcagtaccagggagagaaatcccagagcgaccggcgctccccagacaggagc
aagcactacgatgagcaccggcaccgcgagcacggtcacattcacggcgacaggcatcgc
tccgccagccacggggatcgccgcgatcgtggccgcagtccggataggaggaggcaggaa
agcagtcggcaccgggcagattatgacagaggaaggatgtcacctcatcacagaagttac
gagcgaaacagggagcgggagagggagaggcatcggcaccgtgacagcagaagatcacca
tcgccagacagatcctacaaaaaggattacaagcgagcaggaagccggtctccaagcaga
gagagaaagagaacccgatgggaggaagacagagaaaggtggtctgagaaccagagctcc
aataaagagaaaaattacactgctgtcaaagacaaggagtcagaagagaatgcatctgaa
aaaaatgaagaggaagatgaggaattgcttaagccagtctgggttcgctgtacccattct
gaaagctattattccaatgaccctatggatcaagtgggggactctactgtggtaggaaca
agcaagctgcgggatctgtatgaaaagtttgatgaggagttaggaaagcgacaggcaaag
gccaaagcagccaggccaccatgggagccaccaaaaaccaagctggatgaagatttagag
agctccagtgagtcagagtgtgactctgaagatgacagcagctgctccagcagttcagat
tcggatgttattgacgtcattgcagaaattaagcgtaaaaaagcacaccctgatcgtctc
cacgaagaattgtggtacaatgatccaggacagatgaatgatggacctttgtgcaagtgc
agtgctaaagcccggcgaacaggaataagacatggcatatatcctggcgaagagcccatt
aaaccatgtcgccccatgaccaacaatgctggaagactataccactaccgaattactgtg
tcacctcccacaaatttcttaacagacagacctactgttattgagtatgatgaccatgaa
tatatctttgaagggttctccatgtttgcacacgccccactaacaaacattcctctatgc
aaagtaatcaggtttaacattgactatacaattcatttcatcgaggagatgatgcctgag
aatttttgtgtgagaggccttgaactgttctcttcatatctattcaaagatattttggaa
ttgtatgactggaatcttaaaggtccttcacttgaaaatgattctgtttcttgtcccaga
tatcacttcatgccgcggtttgtgagatttcttccagatggaggaaaagaagtactctca
atgcatcagattctcctctacttgttacgatgcagtaaagctctggtgcctgaagaggag
attgccaacatgcttcagtgggaagaactggaatggcagaaatatgcagaagaatgcaaa
gggatgatcgttaccagccctggcatgaaacccagctcagttcgtattgatcaactagac
cgcgaacaattcaatcctgatgtaattactttccctattattgtgcactttgggatacga
cctgctcaactcagttatgctggagatcctcaataccaaaagctgtggaagagttacgtg
aagctgcgtcacctactggctaatagtcccaaagtcaaacaggctgataaacagaagtta
tcacaaagagaggaagcgctgcagaagattcgtcagaagaacacaatgagacgtgaagtg
actgtggagttgagcagccagggattctggaaaacagggatacgctctgatgtctgccag
catgcaatgatgcttcctgtcctcacccaccatgtccgctaccatcagtgcctgatgcac
ttggacaaattgataggctacacttttcgagataggtgcttactgcagcttgccatgact
cacccaagccatcatttaaattttgggatgaatccagatcatgccaggaattccttatcc
aactgtgggattcgacaacccaagtatggagatagaaaagttcaccatatacacatgaga
aaaaaagggataaacaccctgataaatattatgtcccgtttgggacaggatgatccagct
ccttccaggattaaccacaatgaacgtttagaatttctgggagatgctgtggtggagttc
ttaacaagtgtccacttatactacctgtttcccactctggaggagggaggattagctacg
taccgcactgccattgtgcagaaccagcacctggccatgctggctaagaagttggaacta
gaacgattcatgctctatgctcatggtccagacctttgcagggagtcagatctccgccat
gccatggccaactgctttgaagccctaataggagctgtttatctagagggaagcctagaa
gaagcaaaacaattatttgggcgtttgctcttcaatgaaaaggacctgcgggatgtatgg
cttaattatccactacacccactccaactgcaggagtccaatactgacaggcaactcatt
gagacctctccagttcttcaaaagcttacggagtttgaggaggcaattggagtcatcttt
actcatgttcggcttctggcacgtgcattcactctgaggacagtaggctttaaccatctg
actctaggccacaaccagaggatggaattcctgggtgactccataatgcagttggtagcc
actgagtatttattcatacatttccccgatcatcatgaagggcacttaacgctgttgaga
agttctctggtgaacaacaggacacaggccaaggtggcagaagagctgggcatgcaagag
tttgccatcactaatgacaagacaaaaagacctgtaactcttcgaactaagactttggct
gatctcttggaatcctttattgctgccctgtacatcgacaaagatttggaatacgttcac
actttcatgaatgtttgcttttttccacggctaaaggagtttattttaaatcaagattgg
aatgaccctaaatctcagcttcagcagtgctgcttgactctcaggacagaaggaaaagag
ccggacattcctctttacaagaccttgcagacagtgggaccttctcatgccaggacatac
acagtagctgtttacttcaaaggggaaaggataggatgtggtaaaggtccaagtattcag
caagcagaaatgggagctgcaatggacgcacttgaaaaatataactttccccagatggcc
catcagaaacggttcattgaacggaagtacagacaagagttgaaagaattgaggtgggaa
agagagcatcaagagagagagtcagaggagactgaagaagcaaggaaataa
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integrated database retrieval system
