Hirundo rustica (Barn swallow): 120753216
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Entry
120753216 CDS
T09369
Symbol
CSGALNACT1
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
hrt01100
Metabolic pathways
Module
hrt_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120753216 (CSGALNACT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hrt01003
]
120753216 (CSGALNACT1)
Enzymes [BR:
hrt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
120753216 (CSGALNACT1)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
120753216 (CSGALNACT1)
Glycosyltransferases [BR:
hrt01003
]
Glycan extension
O-Glycan
120753216 (CSGALNACT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Mod_r
Motif
Other DBs
NCBI-GeneID:
120753216
NCBI-ProteinID:
XP_039921206
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Position
5:38931991..38979768
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AA seq
529 aa
AA seq
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MFRRGFILFLPRLVGLLVVACCSMSIVYMLACTPKGDNQQFALPRVHSPTVKEGYEAILQ
EREEQHRNYIISLKKQIAQLKAELQGRTEQLKNMQKQYPDSLDIQLDHSKPEKAQANLLA
FLRSQVDKAEVHSGVKLSTEYAAVPFESFTLQKVYQLETGLTRHPEEKPVRKDKRDELIE
VIELAVGSLNKPDGVSKAKPRVYTASDFVEGIYRTEKNKGTLYELTFKGDAKHQFKKIVL
FRPFGPVMKVKNENVNMADTLINVIVPLAKRASKFRQFMQNFREMGIQQDGRIHLTVVYF
GKEQMNEVKSILENTSKSANFKNFTFIQLNEEFSRGKGLDVGARFWKGNNVVLFFCDVDI
YFTAEFLNSCRLNTQPGKKVFYPVLFSQYNPSIIYGHHDSIPSLEQQLIIKKETGFWRDF
GFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLMVIRTPVRGLFHLWHEKQC
LDELTPEQYKMCMQSKAMNEASHGQLGMLVFKQEIETHLHRQKSSSKKT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaagaggatttattctatttcttccccgacttgtaggcctgctggttgtggcc
tgttgctcaatgtctattgtttatatgttggcttgcacacccaagggtgacaaccagcag
tttgccttgcccagggtgcacagtccgactgtgaaggagggatatgaagccattctgcaa
gagcgagaagagcaacaccgcaattacatcatcagcttgaagaaacaaattgcccagttg
aaggctgagctccagggcaggactgagcagcttaagaacatgcagaagcagtacccagat
tccttggacattcagctcgaccacagtaagccagaaaaggcccaggccaacctgttggct
ttcctccgttcccaagtagacaaagcagaggtgcacagcggcgttaagctgtccacagag
tacgcggcggtgccctttgagagcttcaccctccagaaggtgtaccagctggagacaggg
ctgacacggcacccagaggagaaacccgtaaggaaggacaagcgagatgagttgatagag
gtgatcgagttagcagtggggagcttgaacaagccagatggggtcagcaaagcaaaaccc
cgtgtatacacagcctccgacttcgttgaagggatctaccgcacagaaaaaaataaaggc
acattgtatgagctgactttcaaaggagatgctaaacatcagttcaagaagattgtttta
ttccgaccatttggtcctgtaatgaaagtgaaaaatgaaaatgtcaatatggctgacaca
cttattaatgtcattgtgccattggccaagagagccagcaaatttcggcaattcatgcag
aatttcagggaaatgggcattcagcaggatgggagaattcacctcactgtagtttacttt
ggaaaagaacaaatgaatgaagtcaaatcaatacttgaaaatacctctaagtcagccaac
ttcaagaactttaccttcatccagttgaatgaagagttttccaggggcaaaggattagat
gttggtgctcgattttggaagggaaacaatgttgttctctttttttgcgatgtggacata
tacttcacagctgaattcttgaactcctgtagattgaacacacagccagggaagaaggta
ttttatcctgttctcttcagccagtataaccccagtataatttatggtcaccatgattcc
atcccatctttagaacagcagctgattattaaaaaagaaactggattttggagagacttt
ggttttgggatgacttgccaatacagatctgattttatcaacataggtggctttgacctg
gacatcaaaggctggggtggtgaagatgtgcatctgtaccgcaagtaccttcacagcaac
ctcatggtgatccgaacgcctgtcaggggtctcttccatctgtggcatgaaaagcagtgt
cttgacgagctgactccagagcagtacaaaatgtgcatgcagtccaaggccatgaatgag
gcttctcatggccagcttgggatgcttgttttcaagcaagagattgagacacacctccat
agacagaaatcgagcagtaagaagacatga
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