Hirundo rustica (Barn swallow): 120753287
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Entry
120753287 CDS
T09369
Symbol
TOP1MT
Name
(RefSeq) DNA topoisomerase I, mitochondrial
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrt03032
]
120753287 (TOP1MT)
Enzymes [BR:
hrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
120753287 (TOP1MT)
DNA replication proteins [BR:
hrt03032
]
Eukaryotic type
DNA Topoisomerases
120753287 (TOP1MT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
120753287
NCBI-ProteinID:
XP_039921303
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All DBs
Position
1:786115..806934
Genome browser
AA seq
1273 aa
AA seq
DB search
MGMSKAIGMKSSSRKRKNELEKGQDKPKALPAKKKKLERAVKPSMVKGKKKKPPKVKEKP
LQENIISSSLKQEAADGKGLGSSLWNGIQAEEGAAAGLEETKANSPQVPLVGLEGSSRSQ
DESRNTGPAVGEQLLETQNGIGVPSEGVAGGVASPSGDPLERDVGLTAVGESEEKELDPP
IPQQEEHSQALKRKRGKKQEECNQGKGRKKQEESKQGKGRKEKEENEQGQGLRRNRGKEK
EENDQGQGLRGNRGKEKEENEQGQGLRGNRGKEKEENEQGQGLRGNRGKEKEENEQGQGL
KRKRGKKKEENDQGQGLRRNRGKEKEENDQGQGLRRNRGKEKEENEQGQGLRGNRGKEKE
ENEQGQGLKRKRGKKKEENEQGQGLRRKRGKEKEENEQGQGLKSKRGKEKEENEQGQGLR
RNRGKEKEENEQGQGLRRNRGQEKEENEQGQGLKRKRGKKKEENDQGQGLRGNRGKEKEE
NEQGQGLRRKRGRKDKFEDLMDGIEKEGDEGRNWEGEQGRAKRPRSNSRQGWDDGGKKQE
KGKAKKPRKRKVKGLEKVGKRKIKKEKLLGEELEMGKDEEGEKGVGSEEERVGKGSGYGK
GIKEEEGLGETGSAGEGQEVKKEGDERKEDVPGKEKRKNKEKPEVEKKETEKNNEEEETP
GKSGEAKSKEGEEKKKEEKCNKKTKKPKKEEKHNKKTEKQKEEEKEAENKWKWWEEEKKE
DGVKWMQLEHRGPYFAPLYEPLPEDVRFYYDGKPLKLSLATEEIATFYAKMLDHEYTTKE
LFQNNFFHDWRKEMSSEEQEIIKDLDKCDFREIHKYFVDKNEARKALSKEEKQKLKEEAD
KIQEEYGYCILDGHREKIGNFKTEPPGLFRGRGEHPKMGMLKRRIMPEDVTINCSRDSKI
PEPPEGHKWKEVRCDNTVTWLASWTENIQNTLKYIMLNPSSKLKGEKDWQKYEVARRLKG
VVHTIRAQYRKDWKSKEMKKRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHI
QLHPQLDGQEHVVEFDFLGKDSIRYYNKVSVEKPVFKNLKLFMKNKDPSDDLFDQLTTTF
LNKHLQHLMDGLTAKVFRTYNASITLQEQLKALTNPEDNVAGKLLSYNRANRAVAILCNH
QRSVPKTFARSMEVLQEKIDAKKKQVEEAQEEVKKAEDEFKETKDAKAEANVGKKKQLLK
RLEEQLAKLNVQATDKEENKQIALGTSKLNYLDPRISVAWCKKFGIPIEKIYNKTQREKF
AWAIDMAGEDFEF
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggggatgtcaaaagccattgggatgaagagcagcagcaggaagcgaaagaatgagttg
gaaaaggggcaggacaagccaaaggctctcccagcgaagaagaagaagctggaacgcgca
gtgaagccttccatggtaaaagggaagaagaagaagccaccaaaagtcaaggaaaagccc
ctgcaggagaacatcatcagcagctccctgaagcaggaggcagcagatgggaaaggcctt
ggctcgagcctctggaatgggatccaagcggaggagggagctgcagccgggttggaggag
accaaagcaaactcccctcaagtgccactagtggggctggaaggctcttccaggtcccag
gacgaatcccggaatacgggacctgcagtgggagagcagctcctggagacccagaacgga
attggggtcccaagtgaaggtgtggctggtggggttgcatccccctctggagatcctttg
gagagggatgtggggctcacagctgtgggggagagtgaggagaaggagctggatccccct
atcccacagcaggaagagcattcccaagccctgaaaagaaaaagagggaagaaacaagag
gaatgtaatcagggaaagggaaggaagaaacaagaggagagtaagcagggaaagggaagg
aaggaaaaggaggaaaatgagcagggacagggattgaggagaaatagagggaaggaaaag
gaggaaaatgatcagggacagggattgaggggaaatagagggaaggaaaaggaggaaaat
gagcagggacagggattgaggggaaatagagggaaggaaaaggaggaaaatgagcaggga
cagggattgaggggaaatagagggaaggaaaaggaggaaaatgagcagggacagggatta
aagagaaaaagagggaagaaaaaggaggaaaatgatcagggacagggattgaggagaaat
agagggaaggagaaggaggaaaatgatcagggacagggattgaggagaaacagagggaag
gaaaaggaggaaaatgagcagggacagggattgaggggaaatagagggaaggaaaaggag
gaaaatgagcagggacagggattaaagagaaaaagagggaagaaaaaggaggaaaatgag
cagggacagggattgaggagaaaaagagggaaggaaaaggaggaaaatgagcagggacag
ggattaaagagtaaaagagggaaggaaaaggaggaaaatgagcagggacagggattgagg
agaaacagagggaaggaaaaggaggaaaatgagcagggacagggattgaggagaaacaga
gggcaggaaaaggaggaaaatgagcagggacagggattaaagagaaaaagagggaagaaa
aaggaggaaaatgatcagggacagggattgaggggaaatagagggaaggaaaaggaggaa
aatgagcagggacagggattgaggagaaaaagagggaggaaagataaattcgaggatttg
atggatggcattgagaaagagggggatgagggcaggaattgggaaggggaacagggaaga
gccaaaagaccgagaagcaacagcaggcagggatgggatgatgggggaaaaaagcaggag
aaggggaaagcaaagaagcccaggaagaggaaagtgaagggtttggaaaaggtggggaag
aggaaaataaagaaggaaaaattgctgggagaggagctggagatggggaaagatgaggag
ggagagaaaggagtgggaagtgaagaggagagggtgggaaagggaagtggatatggaaaa
gggataaaggaggaggaaggattgggagagactgggagtgcaggggaggggcaggaggtg
aagaaggagggggatgaaaggaaggaagatgttccagggaaagagaagcggaaaaacaag
gaaaagccagaggtggaaaaaaaagagacagagaagaataatgaagaagaagaaacccca
gggaaaagtggggaagcaaaatctaaagaaggagaggagaagaaaaaggaagaaaagtgt
aataaaaagactaaaaaaccgaagaaggaagaaaagcacaataaaaagactgagaaacag
aaggaggaagaaaaagaggcagaaaacaaatggaaatggtgggaggaggagaagaaggag
gatggagtcaaatggatgcagctggagcaccgggggccctactttgcgcccctctacgag
cccctgcccgaggacgtgcggttttattacgatggaaaacccttgaagctgagcctggcc
acggaggaaattgccacgttttatgccaaaatgttggatcatgagtacaccaccaaggag
ctcttccagaacaattttttccacgactggaggaaggaaatgagctcagaggagcaagag
ataatcaaggacctggacaaatgtgacttcagggagatccacaaatattttgtggacaaa
aacgaggcccggaaagcgctttccaaggaggagaagcagaagctgaaggaggaggcggat
aagatccaggaggaatatggatactgcatcctggacgggcaccgggagaagattggcaac
ttcaaaactgaacctccggggctcttccgtggccgtggggagcaccccaaaatggggatg
ctgaagaggaggatcatgccagaagatgtcaccatcaactgcagcagggattccaagatt
cccgagcccccagaaggtcacaagtggaaggaggtgcgctgtgacaacacggtcacctgg
ctggcctcatggacagagaacatccagaacaccttgaagtacatcatgctgaatcccagc
tccaagctgaagggggagaaggactggcagaaatacgaggtggctcggcgcctaaagggt
gttgtccacacgatccgggctcagtacagaaaagactggaaatccaaggagatgaagaag
cggcaaagagcggtggccctctacttcattgataagctggccctgcgagctgggaacgag
aaggaggaaggggagactgcggacacggtcggctgctgctccctgcgcgtggagcacatc
cagctgcacccccagctggacgggcaggagcacgtggtggagttcgacttcctcgggaaa
gactccatccgttactacaacaaagtgtccgtggagaagccggtgttcaagaacctgaag
ctgttcatgaagaacaaggaccccagcgatgacctctttgaccagctcacgacaaccttc
ctgaacaaacacctccagcacctcatggatggtttgacggccaaagtcttcaggacctac
aacgcttccatcaccctgcaggagcagctcaaggccctcaccaaccctgaagacaacgtt
gcgggaaagctcctgtcctacaaccgagccaaccgagccgtggccatcctgtgcaatcac
cagaggtctgttccaaagacctttgccaggtccatggaagtcctccaggaaaagatcgac
gccaagaaaaaacaagtggaggaagcccaggaagaagtgaaaaaagctgaagatgagttt
aaagaaacaaaagatgccaaagcagaagccaatgtggggaagaagaagcagctgttgaag
aggctggaggagcagctggccaagctgaacgtccaggccacggacaaggaggagaacaag
caaatagctctgggcacatccaagctgaattacctggatcccaggattagcgtggcttgg
tgcaagaaattcgggattcccatcgagaagatctacaacaagacccagagggagaagttt
gcctgggccatcgacatggctggcgaggactttgaattctga
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