KEGG   Hirundo rustica (Barn swallow): 120753365
Entry
120753365         CDS       T09369                                 
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2
  KO
K24066  synaptopodin-2
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120753365 (SYNPO2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:hrt04990]
    120753365 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:hrt04990]
 PDZ domain-containing proteins
  Other PDZ domain-containing proteins
   120753365 (SYNPO2)
SSDB
Motif
Pfam: PDZ PDZ_6 Calsarcin PDZ_2
Other DBs
NCBI-GeneID: 120753365
NCBI-ProteinID: XP_039921410
LinkDB
Position
5:64038852..64102610
AA seq 1092 aa
MLPNCTRKMGTGDYLCIAMSGGAPWGFRLQGGKEQKQPLQIAKVRSKSKAAKAGLCEGDE
VVSINGKPCGDLTYAEIIVLMESLTDVLQLLIKRSSSGINDTVNAERENGKHENIKIEDY
GESTTLQMNAVQEIPHGDLCITEIYSGTHHGAAESNTHFSETKQETTQSHRIPPKVLGTP
TVIVTDEAAVRGTTEERPGAMVELQLSLSEDMHKATNAPAVTLLGAEKCPPSGRGASAQQ
DGSSPLIAVPLSVKEGNIQWSNKVVHFSSSKRIQGAAPSIPRVEVILDCSDREKEAPRSQ
SERGCVDSQVEGGQSEAPPSLLSFAISPEATVQGEDSKHSEKEHRPLKHRARHARLRRSE
SLSEKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELERDED
EGEEGEGEEGDKENTFEVSLLATSESEIDEDFFSDIDKDGKIVTFDWDSGLLEVEKKTKS
GEEMQTLADSTGKGALMFAKRRQRMDQITAEQEEMKASTVQTEEHRETTVTENFQKVSSS
VYQSKEEEISKEQTCVSKSYTDVSQNHSKVVQQNGFGLAPGTNLSFQSSGTQKPASLNKT
AKPFPSGVQNRAAAPFSPVRNVTSPLSDAAAPPPYCSVSPPAEAFYRPVSAPVASKAAPP
PWAATEPTEHIASRDERIAVPAKRTGILQEAKRRSTSKPMFNFKDAPKVSPNPALLSLVH
NAEGKKGTGAGFESGPEEDYLSLGAEACNFMQTQASKQKAPPPVAPKPSLKLSPSAGTPV
SPVWSPSAAASNKPPSFPAPASPQAAYPTPPKSPQYPHSPVHPPSTLDISGPFKGPQASL
ASPNLAPKATPVTPSAGETKPPFEMPPAMSGKGAQLFARRHSRMEKYVVDSETVQANMAR
ASSPTPSLPASWKYSSNVRAPPPVAYNPIHCPSYPPAATKPSSKAAAATKNTKRKPKKGL
NALDIMKHQPYQLDPSLFTFQPPKESLAMKQPLKLSTSKQTLPLPTYLPPGAGSPTRARP
SSVYSVPAYSTQPSFPSNASLPGNESYSPTACSAFSKPETTTSSLFTAPRPKFSAKKAGV
TAQVWKPSVIHE
NT seq 3279 nt   +upstreamnt  +downstreamnt
atgctgcccaactgcaccaggaaaatgggcacaggggattatctctgcattgccatgagc
ggaggggcgccgtggggcttcaggctgcaagggggcaaggagcagaagcagcctttgcaa
atcgccaaggttcgcagcaaaagcaaagcagccaaggctggactgtgcgagggggatgag
gtggtgtctatcaacgggaagccttgtggagacctgacctatgctgaaatcattgttctg
atggaaagcctgactgacgtcctgcagctgcttatcaagagatcctccagtggaataaat
gacaccgtgaatgctgaaagagaaaacgggaagcacgagaacataaaaattgaggactat
ggggagagcaccacactgcaaatgaacgcagtgcaagagataccccatggagatttatgc
atcacagagatttacagtgggactcaccacggagcagcagaaagcaacacacacttttct
gaaacaaagcaagagaccacacaaagccacagaattcctcctaaagtgctaggcaccccc
acagtgatcgtgacagacgaggctgctgtcagagggacgacagaagaaaggccaggtgct
atggttgagctgcagctgtccctctcagaggacatgcacaaggccaccaatgctcctgct
gtgactctcttgggggcagaaaagtgccccccttcaggcagaggagccagtgcccaacag
gacgggagcagccccctcattgcagttcccctgagtgtgaaggagggcaacatccagtgg
tcaaacaaagtagtccacttttccagcagcaagaggatccaaggtgcagctccatcgatc
cccagggtggaggtgatcctagactgctcagacagggaaaaggaagcgcccaggtctcag
tctgaaagggggtgtgttgattctcaagtagaaggagggcagtcagaagcacctccttcc
ctcctctcttttgcaatctcgccagaagccacagtgcagggagaagacagcaagcactcg
gaaaaggagcacagacctctcaagcacagggcaaggcacgcaaggctccgacgaagcgag
agcctgtcggagaagcaggtcaaagaagcaaaatctaaatgtaaaagtattgcactgctg
ctgacggcagctcccaaccccaattccaagggggtgttgatgttcaagaagcgccgccaa
agggcgaggaagtacactttagtcagctacgggactggggagttagaacgtgacgaggac
gagggggaagagggcgaaggtgaagagggggacaaggaaaacacttttgaggtgagtttg
cttgcaacaagtgagtcggaaatagatgaagattttttctctgacattgacaaggacggt
aagatcgtgacatttgactgggacagtggtctgctcgaggtggaaaagaagacaaaaagt
ggagaggagatgcagacgcttgcagacagcacagggaaaggagccctcatgtttgccaag
aggcggcagaggatggatcagattacagcggagcaagaggagatgaaggcaagcacagta
cagacagaggagcacagggaaaccaccgtgacagagaacttccagaaagtgagctcttct
gtctatcaatccaaagaggaggaaatatcgaaagagcagacctgtgtgagcaaaagctac
acagatgtgagccagaatcacagcaaagtggtacaacaaaatggctttggcttagcgcct
ggcacaaacctctcttttcagtcctctggaactcaaaagccagcatctttgaataaaaca
gcaaaacccttcccttctggagttcaaaaccgagcagctgcaccattttcacctgtaaga
aatgtcaccagtcccctttcagatgcagcagcaccacctccttactgctctgtcagcccc
ccagccgaggctttctacagacctgtctcagctcccgtggccagcaaggctgccccaccc
ccgtgggcagccaccgagcccacggaacacatcgcgtccagggacgaaaggattgccgtg
ccagccaaaagaactgggatactgcaggaggcaaagagaaggagcacttccaaacccatg
ttcaatttcaaagacgcacccaaagtaagtcctaatcctgccctgctgtcccttgtacac
aatgcagagggcaaaaaagggactggagctggttttgagtcaggacctgaagaagactac
ctcagtttgggagcagaagcttgtaatttcatgcagactcaagcatctaaacaaaaggcc
cctcctcctgttgccccaaagccttcactcaagctgtctccttctgctggtactccagtt
tcaccagtttggtcgccttcagctgcggcttccaacaagcctccttctttcccagcacca
gcctcacctcaggcagcgtatcctacaccacccaaatctccacagtatcctcattctccc
gtccatcccccaagcactcttgacatttctggtcctttcaaagggcctcaggccagcctg
gcgagcccaaaccttgcccccaaggcaacaccagttaccccaagtgctggagaaacaaag
cctcccttcgagatgccaccagctatgagtgggaaaggagcacagctgtttgccaggagg
cattcccgaatggagaagtatgtggtggattcagagactgtgcaggcaaacatggcacga
gcctcatctccaactccatctttaccagcttcttggaaatattcatctaatgtccgagct
cctccacccgttgcttataatcccatccactgcccgtcttaccctcctgctgctaccaag
ccctcctctaaggccgccgctgctaccaaaaacacaaaaagaaaacctaagaaaggtctc
aatgctttggatattatgaaacatcaaccttaccagcttgatccatctttatttactttc
caacctcctaaggaaagccttgccatgaagcagccgttgaagctgtccacttcaaagcag
acgctgcctttgcctacctaccttccacctggtgctggctctcccacaagggcccggcct
tcttccgtgtactccgtgccggcctacagcacccagccttcgttcccgtcaaacgcctct
ctcccaggaaatgaatcgtattcacccacagcctgctcggcgttttctaagccagaaacc
accacgtcctctttgtttactgctccgaggccaaaattttcagccaagaaagctggcgtc
actgcacaggtgtggaagccgtcggttattcacgagtga

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