Hirundo rustica (Barn swallow): 120753520
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Entry
120753520 CDS
T09369
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120753520 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120753520 (DHX15)
03009 Ribosome biogenesis [BR:
hrt03009
]
120753520 (DHX15)
Enzymes [BR:
hrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120753520 (DHX15)
Spliceosome [BR:
hrt03041
]
Complex A
U2 snRNP components
U2 related factors
120753520 (DHX15)
Complex B
120753520 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120753520 (DHX15)
Ribosome biogenesis [BR:
hrt03009
]
Eukaryotic type
90S particles
Helicases
120753520 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
Atrophin-1
AAA_29
Motif
Other DBs
NCBI-GeneID:
120753520
NCBI-ProteinID:
XP_039921739
LinkDB
All DBs
Position
5:complement(17660900..17711234)
Genome browser
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRTTDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLR
PTSNSTYYAAAGLPAIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
VRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctcgatctgggcgacgattacagctccagcaagaaacgcacc
accgacgggaaagatcgggaccgggacagggaccgagatgaccgctcgaaagatcgtgac
agggatcgtgacagagatagagatcgtgacagagaaagggacaaggaaaaagatctgcga
cctacgtctaactcaacatattatgcagctgctgggttaccagctataaaaccagcaatg
attccacacagtattaaccctttcacaaatctaccacataccccacgatattatgatatc
ctgaaaaaaaggctacaacttcctgtctgggaatataaagaaagatttacagatattttg
gttaggcatcagtcgtttgtgctggttggagagaccgggtctggtaaaacaacacagatc
cctcagtggtgcgttgactacatgcgctcattacctggccccaagaggggagtggcgtgt
acccagccgcggcgagtggctgcgatgagcgtggcacagcgcgttgctgatgagatggat
gtcatgctgggccaggaggttggttactccattcgctttgaagattgcagtagtgcaaaa
accattttgaagtatatgactgacggtatgttacttcgtgaagcgatgaacgatcctttg
ctggagcgctatggtgttataattcttgatgaggcccatgagagaacactggctacggat
atcttgatgggagttttgaaggaagttgtaagacaaagatctgatttgaaggttatagtt
atgagtgctactttagatgctggcaagtttcagatctattttgataactgtcctcttcta
accatcccgggtcgcacccatcctgtggagatattctatactccagaacctgaaagggac
taccttgaggctgccattcgaacagtaatacaaattcacatgtgtgaagaagaagaagga
gatctcttactctttcttacaggacaagaggagattgatgaagcctgcaagaggataaaa
cgtgaaattgatgacttaggtcctgaagttggtgacataaaaatcattccattgtattcc
acccttcctccacagcagcagcaaaggatatttgaacctcccccaccaaaaaaacaaaac
ggagcaataggaagaaaggttgtggtgtccactaacattgctgagacatcattgacaata
gatggcgtagtgtttgtgattgatccgggctttgcaaaacagaaggtgtacaatcctcgt
atcagagtggagtctttgttggtgactgccatcagtaaagcgtctgcccagcagcgagct
ggccgtgctggtcgtactcgaccaggcaagtgcttcaggctttatacagagaaagcctac
aaaactgaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatctgta
gtattacagctcaagaagcttggtatagatgatttggtgcactttgattttatggatcct
ccagctcctgaaactctgatgagagctttagaacttttgaattatctggctgctttaaat
gatgatggagacttgactgagttgggatccatgatggctgaatttccattggacccacag
ctggctaaaatggttattgcaagctgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaagcaaaatcatgagtcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgcctcgtagaagcacagattttaccagccgagactattacatcaacataaga
aaggcattagttactgggtatttcatgcaggtggcacatttggagcgaacagggcattac
ttaacagtgaaagataaccaggtggtgcagttgcatccctccactgttcttgatcacaaa
ccagaatgggtgctgtataatgagtttgtccttacaacgaagaattacatccggacatgt
acagacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgcgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaag
gaatactcacagtactga
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