Hirundo rustica (Barn swallow): 120753569
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Entry
120753569 CDS
T09369
Symbol
YTHDC1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120753569 (YTHDC1)
Spliceosome [BR:
hrt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120753569 (YTHDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
120753569
NCBI-ProteinID:
XP_039921825
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All DBs
Position
5:complement(39020097..39040790)
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AA seq
715 aa
AA seq
DB search
MATDSREEKDGELNVLDDILTDAPDQDDELYNPDSEQDKSEKKGSKRKTDRMENAESKRQ
KPSVHSSRQMMPKPPSSSVSNNKRIVSTKGRPVSEYKTEEYQRSDRNKRPDGDRRMRMSS
SSREPYKGQPEKSYMRKRDSDRRAKSSTPDGSERIRHDVDRRPSRSSHSSKEEVNSEEYC
SDHETGSSGSSEQGNTENDEEGMEEEEDDEGEEDEEVEEDGEDDEEEYEQDERDQKEGND
YDTRSEASDSESESASFTDGSVRSASGSDASDEKKKERKRARGISPIVFDRSGSSASESY
AGSEKKHEKLSSSVRAVQKDQTSKLKYILQDARFFLIKSNNHENVSLAKAKGVWSTLPVN
EKKLNAAFRSARSVILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVF
KIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEIEPECGTQLCLLFPPDESIDLYQV
IHKMRHKRRMHSQPRSRGRPSRRDPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGY
IKDPRYPEVDRRFSGVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYY
QHHAPPPQAHPPYSGHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDR
ERERDRPRDNRRDRERDRGRDRERERERICDRDRDRGERVSYGSMGECCYQVCKY
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatagccgggaggagaaggatggtgaactgaatgttctggatgacattttg
actgatgctcctgaccaggatgatgagttgtataaccctgacagtgagcaagacaaaagt
gaaaaaaaggggtcaaagagaaaaactgacaggatggaaaatgctgaaagcaagaggcaa
aaaccttctgtgcattcctcgaggcagatgatgccaaagcctcccagctcatcagttagc
aataacaagagaatagtgagtacaaaaggaagaccagtgtcagagtacaagacagaggag
tatcagagatctgacagaaacaagcgcccagatggtgatcgaaggatgcgaatgtcaagc
agttccagggaaccttacaaaggacaaccagagaagtcttacatgaggaagagggatagt
gacagaagggcaaagtcttctacaccggacggttcagagagaatcaggcatgatgtggat
agaagaccaagcagatctagccattcttctaaagaagaagtgaactctgaggaatattgt
tcagatcacgagactggcagtagtggttcctctgaacaaggcaacacggagaacgacgag
gaaggaatggaagaagaggaagatgatgaaggggaggaggatgaagaggtggaagaagat
ggggaggatgatgaagaagagtatgaacaggatgagagggatcagaaggaaggaaatgac
tatgacacacggagtgaagccagcgattctgagtctgaatctgcctctttcacagatggg
tcagtcagatctgcgtctggttcagatgcatcagatgagaaaaagaaggagaggaagaga
gcaagaggtatctctccaattgtttttgacagaagtggaagttctgcatcagaatcatat
gcaggttcagaaaagaagcatgagaaattatcatcttccgttcgtgctgtccaaaaagac
caaacaagcaaacttaaatacattctccaagatgcaagattctttctcatcaagagtaat
aaccatgaaaatgtatcacttgctaaggcaaagggagtatggtcaacacttccagtgaat
gaaaagaagcttaatgctgcatttagatcagcaaggagtgttattttgatattttctgta
agagagagtgggaaattccaagggtttgcaagattatcttcagagtcccatcatggagga
tcacctatacattgggtgctgcctgcaggaatgagtgcaaaaatgttgggaggtgtcttt
aaaattgactggatttgcaggcgggaattgccattcactaagtctgctcacctgaccaat
ccttggaacgaacataagccagtaaagattggacgcgatggacaggaaattgagccggaa
tgtggaacccaactttgtcttctcttccctcctgatgaaagtattgacttgtatcaagtc
attcataaaatgaggcacaagagaagaatgcactcacaaccccgatcaagaggacgccca
tcccgtcgagaccccgttcgggacgtgggaaggcgtcgaccagaagattatgatattcat
aacagcagaaagaaaccaaggattgactatccccctgagtttcaccaaagaccagggtat
ataaaggatcccagatatcccgaagtagacagacgattttcaggagttcgacgagatgta
tttttaaatgggtcctacaatgattacgtgagggagttccacaacatgggaccaccacca
ccatggcaaggaatgccaccgtatccaggtatggagcaaccaccacaccacccttactat
cagcaccatgcacctccacctcaagctcaccctccatactcaggacatcatcctgtaccc
catgaagcgagatacagagacaaacgagtacacgactatgacatgagagtagacgacttc
cttcgccgcacgcaagccgttgtcagcggtcggagaagccggccccgggagagggaccga
gagcgggagcgcgaccggcctcgagataatcggagagacagagaacgtgacagaggccgt
gatcgggagagggagagagagaggatttgtgaccgggacagagacagaggtgaaagagtt
tcatatggttcgatgggagaatgctgctatcaagtatgcaaatattga
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