Hirundo rustica (Barn swallow): 120753586
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Entry
120753586 CDS
T09369
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03013
Nucleocytoplasmic transport
hrt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120753586 (PNN)
03015 mRNA surveillance pathway
120753586 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120753586 (PNN)
03041 Spliceosome [BR:
hrt03041
]
120753586 (PNN)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120753586 (PNN)
Spliceosome [BR:
hrt03041
]
Complex C
Other components
EJC/TREX
120753586 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
120753586
NCBI-ProteinID:
XP_039921841
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All DBs
Position
6:complement(23999008..24008796)
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AA seq
693 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLALTGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGASSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVAIATERQKRRQEIEQKLE
VQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTK
PHIFYIPGRMCPATQKLMEESQKKMNALFESRRNEFAEQINKMEARPRRQSMKEKEHQEV
QNEEKKEEQNKEQEEGKVAQQVEEMETGNQHNDVEMEEAGEEKGKTGSGSGHSDAEKEQE
EDEQKHDTEMKVEEPTEVRENDKQQDGQQEEVTVVKEESENIQPVDNEQDVAEMNEADSV
EPVENENGREIEPETECDVQPEKVCNVASPKKEKGIKTENKAELEETQEKTPEAQTESVA
EALSQPQSVPLAQSPQLSQSTQDTEPQTDKDENAVVSVKAIEAQAEQNQTPSAEGKSKTR
SRSRGRAGNKTGHNRSSSSSSSSTSSSTTSASSSSTGSSTSRSSSTSSSTTSGSTSRDSS
SSSSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGSRDTKGSKDKSSR
SDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgcgcgcgctgcaggagcagctggagaaagccaaggaaagcctcaag
cacgtggacgagaatatccgcaagctcacgggccgggaccccaatgatgtgaggccccct
caaaacaggctgttagccctcacaggccccggtggaggtagagggcgtgggagcttattg
ctaaggcgtggattctcggatagtggaggaggacccccagccaaacagagggatcttgaa
ggtgcatccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgatgatattaaaaagccagcgttgccatcttctgttgttgctacctcc
aaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgttgatgggcacccttcaaaaatttaaacaggagtcc
acagttgctattgctactgagaggcaaaagagacgacaagaaattgaacaaaaacttgaa
gtgcaggcagaggaggagagaaaacaagttgaaaatgagaggcgagaactgtttgaagaa
agacgtgctaaacagacagagctgcggttattggagcaaaaggttgagcttgctcagttg
caagaagaatggaatgaacataatgctaaaataattaaatacataagaacaaagacaaaa
cctcatatattctacatacctggcagaatgtgtcctgctacgcagaagctgatggaagag
tcacagaaaaagatgaatgccctctttgaaagcaggagaaatgaatttgcagagcagatt
aacaaaatggaggccaggcccagaagacaatctatgaaggaaaaagaacatcaggaggtg
cagaacgaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcag
caggtggaagagatggagacaggtaatcagcacaatgatgtagaaatggaggaggcaggg
gaggaaaagggaaaaacaggttcaggttcagggcatagcgatgcagaaaaagaacaggaa
gaggatgagcagaaacatgacacggagatgaaagtagaagagcctactgaggtgagggag
aatgacaagcagcaggatggtcagcaggaggaggtcacagttgtaaaggaggaaagtgaa
aacattcagccagtggataatgagcaggacgtggctgaaatgaatgaggcagatagtgta
gaacctgtagaaaatgaaaatggcagagaaatagaaccagaaacagagtgtgatgttcag
ccagaaaaagtgtgtaatgttgcttctcccaagaaggagaaaggtataaaaacagaaaat
aaagctgaacttgaagaaacacaggagaaaacacctgaagctcaaacagaatctgtggct
gaggctctatctcagccacagtctgtgccactagcacagtcacctcagttgtctcagtcc
actcaggatacagagccccagacagacaaggatgaaaatgctgtggtgtctgtaaaggcg
attgaagcccaggcagagcagaatcagacaccgagtgcagaaggtaagagtaagactagg
agcagaagcaggggtagggcagggaacaaaaccggtcataaccgtagcagcagcagtagt
agcagtagcacttcaagcagtactaccagtgcaagtagttccagtactggcagcagtacc
agtcggagcagttccaccagcagcagcactacaagtgggagtacgagcagggacagtagc
agcagtagctctagcagtagtgaaagtagaagtcgaagccgaggcagagggcataacaga
gatagaaaacgcagaaggagcacagacaggaagcgaagggatgcttcaggagtagataga
agtcacaagtcctcaaaaggtagtagagacaccaaaggctcaaaggataaaagttcgagg
tctgacagaaagagatctatatcagaaagtagtcggtcaggcaagagaacttcacggagt
gaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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