Hirundo rustica (Barn swallow): 120753642
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Entry
120753642 CDS
T09369
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1
KO
K27396
protein Smaug
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120753642 (SAMD4A)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120753642 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
120753642
NCBI-ProteinID:
XP_039922027
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All DBs
Position
6:3295484..3393201
Genome browser
AA seq
705 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLADCTELHILEG
EANNPGIINQWQQESKDKAISLLLTHLPLLKPGNIEAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSGGFGGQGRGRSDSLDYGQAHYYHQR
QNSDDKLNGWQSSRDSGISVSACSWQDKNLACENGHLPLYSSSSVPTTINTIGTSTSTIL
SGQTHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCIPSDHAPLSPQSSVASS
GSGGSEHLEDQPSARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLEGDILEGGNLRVPLQELHQMILTPIKAYSS
QTSSTEEHGRDVDSHRPSSLLGSDGQGSGCKDSAAAGLQQHHLPGCEGESGGAPLPEGDL
PGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTEIQKKRLLSWKQQVQKLF
RSFPRKSLLELSGYRQQRSRGFGQSNSLPTAGSAGAGLARRNPRQFQIPSRNLPTARLGL
LGPTGLLGTPQRSPAASPAILKQGRQNLWFANPGGSNSMPSRSHSSVQRTRSLPVHTSPQ
TMLMFQQPEFQVPVTEPDINNRLESLCLSMTEHALSDGVDRTSTI
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggttggcgtgctggccgggtggttcaagggctggaacgagtgc
gagcagactgttgcgctgctctccctgctcaagcgcgtcagccggacccaggctcgcttc
ctgcagctctgcctcgagcattccctggcggactgcaccgagctccacatcctcgaaggg
gaggccaacaaccccggaatcatcaaccagtggcaacaggaatccaaggataaagcgatc
tccctcttgttaacccacctgcctttactgaagcccggcaacatcgaggcgaaggtcgag
tacatgaaactcttgcccaagatcctggcgcactccatcgagcacaaccagcacatcgag
gagagcaggcagctgctgtcctacgccttgatccaccccgccacctccctggaggacagg
agcgccctggccatgtggctgaaccacctggaggaccgcacgtcggggggcttcggcggg
cagggccgcggccgctcggactcgctggactacgggcaggctcactactatcaccaaaga
cagaactccgacgacaaactcaacgggtggcagagctcccgggactccggcatcagcgtc
agcgcctgcagctggcaggacaagaacctggcctgcgagaacggccacctgcccctctac
tcctcctcctccgtccccaccaccatcaacaccatcggcactagcacaagcaccattctc
tcaggccagacacaccacagccctttgaaacgctctgtgtcccttaccccacccatgaat
gtgccaaaccaacctctaggacatggatggatgtctcatgaggacttacgagctagagga
ccccagtgcatcccttccgatcatgcccccctgtctccacaaagcagtgtagcctcttcg
ggaagtggtgggagtgaacatttagaagatcagccttccgctcgtaacacattccaggag
gaagggagtgggatgaaagatgtcccggcctggctgaagagcctccggctgcacaagtac
gccgccctcttctcccagatgacgtacgaggagatgatggccctcaccgaatgccagctc
gaggcacaaaatgttaccaaaggtgcgagacacaaaatagtaatcagtatccaaaagcta
aaagaacgacaaaacctgctcaaatctctagaaggggacatcctggaaggcggcaacttg
cgcgtcccgctgcaggagctgcaccaaatgatcctcacccccatcaaagcctactcctcc
cagacctcgagcacggaggagcacggccgggacgtggactcgcaccgcccctcctccctg
ctgggctcggacggccaaggctcgggctgcaaggactccgcggcggccgggctgcagcag
caccatctgccggggtgcgagggagagtccgggggagcccctttgcccgagggggacctg
cccgggcagttcacccgggtgatggggaaagtctgcacacaacttttagtttcccgaccc
gacgaagagaatataagttcctatttacagctcatagacaaatgtctaatccacgaggcg
tttacagagatccagaagaagcggctgctgtcatggaaacagcaggtgcagaaactcttt
cggtctttccctcggaaatccctgctggagctgtcgggctatcggcagcagaggagccga
ggctttggccagtccaactccctcccgacagccggatccgctggggcagggctggcacgg
aggaacccccgccagttccagatcccctcccgaaacctccccacggcccgcctggggctg
ctgggccccacggggctgctgggcaccccccagcgcagccctgccgccagccccgccatc
ctcaagcaaggcagacagaacctgtggtttgccaaccccgggggcagtaacagcatgccc
agccggagccacagctcggtgcagaggacgcgctcgctgccggtccacacgtccccgcag
accatgctgatgtttcagcagccagagttccaggtgccggtgactgaacctgacatcaac
aacaggctggagtccctgtgcctgagcatgacggagcacgcactcagcgatggtgtcgac
agaacctccacgatctag
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