Hirundo rustica (Barn swallow): 120753690
Help
Entry
120753690 CDS
T09369
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120753690 (CTR9)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
120753690 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_6
TPR_7
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
120753690
NCBI-ProteinID:
XP_039922224
LinkDB
All DBs
Position
6:complement(59411625..59431678)
Genome browser
AA seq
1168 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPISRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKAEEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHARNSNSDSEDGEQQRSKRVVSDSDSDNRNKSGSEAGSPRRSSARASE
EESDSDASPRKRRRSESEQSDNESVQSGRSRGSGGSENESRPASRSAESDRDSERGSDRE
GSARASGNESEAEASNEEGSEGGSDDSD
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagatccctctgcgggacaccgacgaggttatcgagcttgac
ttcgatcagttgcccgagggtgatgaagttataagtatattgaaacaggaacacacccag
ctgcacatatggattgccctagcgctggaatactacaagcaaggcaaaacagaagacttc
gtgaagctgctggaagctgctcgcatcgatggcaacctggactacagagaccacgagaaa
gatcagatgacgtgtctggacactctggcagcctactatgtgcagcaggctcggaaagag
aagaacaaagacaacaagaaggagctcatcacccaggccaccctgctgtacactatggct
gacaagatcatcatgtacgatcagaaccacttgttgggaagagcctgcttttgcctgctt
gaaggtgataagatggaccaagctgatgcacagttccactttgtgctcaaccagtctccg
aataatattcctgccctactcggtaaggcatgcatttctttcaacaagaaggattacaga
ggagcccttgcctactacaagaaagcactgcgtaccaatccgggctgcccagccgaggtt
cggctgggaatgggccactgctttgtgaaactgaacaagctggaaaaagcccgcttggcc
ttcagcagggctctggagctgaattccaagtgtgtcggggccttggtcggactcgctgtt
ctggaactcaataacaaggaggctgattccatcaagaatggtgttcaactcctctctagg
gcttacacaattgatcccagtaatccaatggtgttgaatcacttggctaatcacttcttt
ttcaagaaggactatggcaaagtgcaacacttggctcttcatgctttccacaacacagaa
gtggaagcaatgcaggcagagagctgctaccagctggcgaggtcttttcacgtgcaggaa
gattatgatcaagctttccagtattattaccaggccactcagtttgcctcatcttctttc
gtacttccgttttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgct
tcacagtgctttgaaaaagtcttgaaagcctatcctaacaattatgagactatgaaaatc
cttggatctctttatgcagcttcagaagaccaagagaaacgggatattgcaaaggggcat
ttaaagaaagtcacagaacaatatcctgatgatgtggaggcatggattgagctagcccaa
attctagaacagactgatatacagggtgctctgtcagcctatggaacagccacacgcatt
ctgcaggagaaagtacaggctgatgtccctccagagatcctgaataatgtgggtgccctg
cacttcaggctgggaaacctgggagaagcaaagaaatatttcttggcgtcgctggatcgt
gcgaaagcagaggctgagcatgatgagcattactacaatgccatctctgtgacaacatcc
tacaacctcgccaggctctacgaggccatgtgtgaatttcacgaagcggaaaagctctat
aaaaacatcttgagagaacatccgaattacgttgactgctacttgcgcttgggagctatg
gccagggataaagggaatttttatgaggcttctgattggtttaaagaagctctgcaaata
aatcaggaccatccagatgcctggtctctgattggcaatcttcatttggctaaacaagag
tggggtccaggacagaagaaatttgaaaggatattgaagcagccctccacacaaaatgat
acttattccatgctggctcttggcaacgtctggttgcagactctccatcaacccacaaga
gacagagaaaaggagaaacgtcaccaagaccgtgcattagccatctacaagcaagtcctc
agaaatgacccaaagaatttgtatgctgctaatggcataggtgctgtcctggcacataaa
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggccacagcagatatc
agcgatgtgtggctcaatttggcacatatctacgtggagcagaagcagtacatcagtgca
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcaaaacactgaagtgttg
ttatatttggcccgggcactgtttaaatgtggcaagttgcaggaatgcaaacaaactttg
ttaaaggccaggcatgtggctccaagtgatacagtcctcatgtttaatgtggctttagtg
ctgcaaagacttgctacctctgtcctgaaagatgaaaaaagcaatctgaaggaagtgctt
aatgctgtgaaagaactggagctcgcccacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcacttgctgctacagaagccaggcaatgctccgactta
ctgagccaggcccagtatcacgtggctcgggcgcgcaagcaggatgaggaggagagggag
ctgcgtgccaagcaggagcaggagaaggagctgcttcgccagaaactgctgaaagaacag
gaagagaagcgcctgagagaaaaagaagagcagaagaaacttctggaacaaagagctcaa
tatgtggagaagaccaagaacattctaatgttcactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggcggtggaggcaggcgttccaaaaaaggagcaggggagtttgatgag
tttgtcaatgatgacagtgatgaagatctgcccatctctagaaagaaaaagaagaggaag
ggcagtggcagtgaacaggatggggaagaagaggagggtgagagaaagaagaagaagagg
aggagaccccagaaggcagaagaggggagtgatgatgaagaacacgaaaatggcccgcgg
cctaaaaagcgacgtccacccaaagcggagaagaagaaggcccccaaaccagagcgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcgtcaagtgacgattct
tctgatgaggacaaactcaaaattgctgatgatgggcacgctagaaacagcaacagtgat
tccgaggacggggagcagcagcgcagcaagcgcgttgtttccgacagcgattccgataac
aggaacaagtccggcagcgaggcgggcagtccccgcaggtccagcgcccgcgcctccgag
gaggaatctgacagcgacgcgtccccgaggaagaggcggcgctcggagtcggagcagtcg
gacaacgagtccgtgcagtcgggcaggagccgcggctccggcggctccgagaacgaatcg
cgcccggcttcgcgcagcgccgagtccgacagggactccgagagaggctctgaccgcgag
ggctctgccagagcttccgggaacgagtctgaagccgaggcgtccaacgaggagggctcg
gaagggggctcggatgacagcgactag
DBGET
integrated database retrieval system
