Hirundo rustica (Barn swallow): 120753896
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Entry
120753896 CDS
T09369
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120753896 (ZEB1)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120753896 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
120753896
NCBI-ProteinID:
XP_039922658
LinkDB
All DBs
Position
1:141713758..141836864
Genome browser
AA seq
1112 aa
AA seq
DB search
MADGPRCKRRKQPNPRRNNVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHIVLPENSEREGSTNSCWEDEAGKERKEILGPEAQTNEIGCTVKEDECDSDAENE
QNHDPNVEEFLQQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDPRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKMSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPLNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHANLASKEQETINNASIQQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKESSVPANTCKNEKLPEDLTVKSEKDKNFEGETNDSTCLLCDDCPG
DLNALQELKHYETKSPPQLPQPSGTEAEKPESPVPSETGENSLSPGQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQVKLSSPADND
DQAATTNVSEPQNSTNNSQNPVSTTKSQTLPGASTLNGSHSSTPSASPLNLSSSRNSQGY
TYTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DNSVTDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTTVNPAVHETPPKQTQANGNQDERQDTSSEGISNVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKRETEERDSAEPEEMGPEILSSEHVVVRASPSQ
IDSDERESLTREEEEYSEKEEEEEEEKDIEGLQEEKECRELQEVGDAEEEAAVEEEDGKT
EGNENDEAVNQASNAEPEVIQNNGQVSEENNE
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcagccgaacccgcgccgcaacaacgtc
accaattacaacaatgtggtagaagcaaactcagattcagatgatgaagataaattgcat
atagtggaagaggaaagtgtaacggatgcagcagactgtgatgctagtgtgccagaagat
gacctgccaacggaccatatagtattaccagaaaacagcgaaagagaagggagtacaaac
agttgctgggaagatgaagctggaaaagaaagaaaggaaatcctggggcctgaagctcag
acaaatgaaattggatgtacagtaaaagaagatgaatgtgattctgatgcagaaaatgag
caaaaccatgaccctaatgttgaagaattccttcaacaagaagatacagctgttatctac
cctgaagcacctgaggaggaccagagacaaggcacaccagaagccagtggtcaggatgaa
aatggaactcctgacgcgttttcccaactgctcacctgcccgtactgcgatcgagggtac
aaacgttttacctctctgaaggaacacattaaataccgccatgaaaaaaatgaagataac
ttcagttgctccctgtgcagttacacgtttgcgtacagaacgcagctcgaccgccacatg
acatcacacaaatcaggaagagatccaagacatgtgacgcaatccagcggtaatcgaaaa
ttcaagtgcactgaatgtggaaaagcttttaaatataaacatcacctaaaggagcaccta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccat
tctggttcatacagttcacacataagcagtaagaagtgtattggtttgatgcccgtgaat
ggtcgagcccgatcagggctcaagatgtctcagtgctcctccccttccctttctgcatca
ccaggtagcccagcaagaccacagatacgacaaaagatagaaaataaacccttgcaagag
cagcttcctcttaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtg
gttgcttcaggaattaattgttcgacccctttgcagaatggggtttttagtggtggtagc
cctttgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctaccaacagta
ggtctggtgtctcccataagcatcaatttaagtgacattcaaaatgtactgaaagtcgca
gtggatggtaatgtaataaggcaagtactggaaaacaatcatgctaatcttgcgtccaaa
gaacaagaaaccatcaacaatgcatctatacaacaagctggccattccctcatttcagct
atcagtcttcctttggttgaccaagacgggacaaccaaaattatcatcaactacagcttg
gagcagccaagtcagcttcaggttgttccacaaaatctaaaaaaagaaagctctgttcct
gcaaatacttgcaaaaatgagaaattaccagaagatctcacagtgaagtctgagaaagat
aagaattttgaaggagagaccaacgatagcacttgtcttctttgtgatgactgtccagga
gatcttaatgcacttcaagaattaaagcactatgaaacaaaaagccctcctcagcttccc
cagcccagtggaacagaagctgagaaacccgagtcccctgtcccatcagaaaccggggag
aacagcttgtctcctggtcagccacctttaaagaaccttctatcgctcctaaaagcgtat
tatgcattaaatgcacaaccaagcgcagaagaactttcaaaaatagcagattccgtaaac
ctaccactggatgtggtaaaaaagtggtttgaaaaaatgcaagctggacaaatttctgtg
cagtcttctggaccatcttctcctgaacaagttaaattaagcagtcccgcagacaatgat
gatcaagcagcaactacaaatgtgagcgaaccccagaacagcacaaataactcacaaaat
cctgtcagtacaacgaaatctcagactttaccaggggcttcaactctgaatggttcacac
agtagcacgccatctgcatcaccactaaacctttcttcatcaagaaattcacagggttac
acgtacacagcagagggtgtacaagaagagccacaaatagaacctcttgacctttcgcta
ccaaagcaacatggagaactgttggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttaacttgtgcaaaaaaagaaccacaaaag
gacaacagtgttacagactctgatcctattgtaaatgtaatcccaccaagtgccaatccc
ataaatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccctgcttgagagctctcgctgccaataagcaaaccattttgattcca
caggtggcttatacatactctactacagttaatcctgcagttcatgagacaccaccaaaa
cagacccaagccaatggaaatcaggatgaaaggcaagacactagctcagaaggaatatcc
aatgtagaagatcaaaacgattctgattcaacacccccaaagaaaaaaatgagaaagaca
gaaaatgggatgtatgcatgtgatttatgtgacaaaatattccagaagagcagctcatta
ttgagacataagtatgaacacacaggtaaaagacctcatgagtgtggaatctgtacaaaa
gcatttaaacacaaacaccatttgattgaacacatgcgactgcattctggggaaaagccc
taccaatgtgacaagtgtggaaagaggttttcacactcggggtcttactctcaacacatg
aaccatcgctactcctactgcaaaagggagacagaggagcgcgacagcgccgagcccgag
gagatgggcccggagatcctgagcagcgagcacgtggtggtcagggcatccccctcgcag
atcgactcggatgagagggagagcctaaccagggaagaggaggaatacagtgaaaaagag
gaagaggaggaagaagaaaaagacatagagggacttcaggaagaaaaagagtgtagggaa
ctacaagaagtaggggatgcagaagaagaagcggcagtagaagaggaagacgggaaaact
gaaggtaacgagaatgatgaagctgtaaatcaagcaagcaatgcagaaccagaagttata
caaaataatgggcaggtgtcagaagaaaataacgaataa
DBGET
integrated database retrieval system
