Hirundo rustica (Barn swallow): 120753967
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Entry
120753967 CDS
T09369
Symbol
PALS1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120753967 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120753967 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
PDZ domain-containing proteins
MAGUK family proteins
120753967 (PALS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
L27
PDZ_6
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
120753967
NCBI-ProteinID:
XP_039922856
LinkDB
All DBs
Position
6:complement(32138417..32193938)
Genome browser
AA seq
675 aa
AA seq
DB search
MTTSHMNGHITEDSDNEAKNVDLVSPEEPQKHREMAVDCPGDLGSRMMPMRRSAQLERIR
QQQEDIRRRREEEGRKQELDLTASMRLKKLAQIPPKTGIDNPIFDTEEGIVLESPHYTVK
TLEVEELLNSLKHIQHVLVDPQSQEDISLILQLVQNSDFQNAFKIHNAVTVHMNKASPPY
PLSSNAQELAQEVQSVLKPSHHKDGQELNALLNAPHMQALLLAHDKVAEQEMQPEPMTDE
KIYENVGMYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKTFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIVLIGPQNCGQNELRQRLMNNEVDRFASAVPHTTRSRRETEVAGRDYHFISRQAFESDI
AAGKFIEYGEFEKNLYGTSIDSVRQVINSGKICLLNLHTQSLKTLRNSDLKPYIIFVAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttctcatatgaatggacatatcacagaggattctgacaatgaagcaaaaaat
gtggatcttgtgtctcctgaggaacctcagaagcacagagaaatggctgttgattgccct
ggcgacttgggctccaggatgatgcccatgcggcgcagtgctcagctggagcgaatccgt
cagcagcaggaggacataaggcgcagacgggaagaagagggaaggaaacaagaactggac
cttactgcttccatgaggctaaagaaactagcccaaattccccctaaaactggaatagat
aatccaatatttgacacagaagaagggattgttttggagagtcctcattacactgtgaaa
acactagaagtggaagaactgttaaattctcttaagcatatccagcacgttttggtagac
cctcagagtcaagaggatatctcgctgattttacagcttgttcaaaatagcgattttcag
aatgcatttaagatccacaacgctgttacagtgcacatgaacaaagccagccctccatat
cctctcagctccaatgcacaagagctagcacaagaggtgcagagtgttttgaagcccagc
caccataaggatggacaggagcttaatgctttgttgaatgcccctcacatgcaggcactt
ctactggctcatgataaggttgcagaacaagaaatgcaaccagagcctatgacagatgaa
aagatttatgagaatgttggcatgtatggaggggagacggttaaaatagttcgcattgag
aaagctcgggatattcctttgggtgccactgttcgcaatgaaatggattctgttatcatc
agtcgaatagtcaaaggaggtgctgcagagaagagtgggctgttacatgaaggggatgaa
gttctggagatcaatggcattgagatccgtggaaaagatgttaatgaagtttttgacttg
ctggctgacatgcatggtactctgaccttcgtattgattcccagtcagcagagcaagcca
ccccctgcgaaggagacagttatacacgtcaaagcacattttgactacgatccctctgat
gacccttacgtcccctgccgagagttaggcctgtcttttcaaaaaggagacatactccat
gtgatcagtcaagaagatccaaactggtggcaggcttacagagatggagatgaagataat
cagccactggcaggccttatccctggaaaaacctttcagcaacaaagagaagcaatgaag
caaaccatagaagaagacaaggagcctgaaaaatcaggaaaactctggtgcgccaagaaa
aacaaaaagaaacggaaaaaggttttatacaatgcaaataaaaatgatgattatgacaat
gaggaaattctgacctacgaggaaatgtcactgtaccatcagccagcaaataggaaacgt
cccatcgttctgattggcccccagaactgcggccagaacgagctgcggcagaggctgatg
aataacgaggtggatcgctttgcctccgccgtgccccatactactcggagtaggcgagag
actgaagtagctggcagggattatcatttcatctcccgccaggcatttgagagtgacata
gctgcagggaagttcattgaatatggagagtttgagaagaacctctacggtacgagcata
gactccgtgcggcaagtcatcaactcgggcaagatatgccttttaaatcttcatacccag
tcactgaaaacactgcgtaactctgacttgaagccatatattatatttgttgcaccacct
tcacaagagcgactacgtgctttattggccaaagaagggaaaaatcccaagccagaagag
ctgagagaaatcatagagaagacaagggagatggaacagaacaatggccactactttgat
acagcaattgtgaattctgatcttgataaggcgtatcaggagttacttcggttaataaat
aagctcgacacagaaccgcagtgggtgccctccacctggctacgatga
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