Hirundo rustica (Barn swallow): 120754056
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Entry
120754056 CDS
T09369
Symbol
SLC6A5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120754056 (SLC6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrt02000
]
120754056 (SLC6A5)
Transporters [BR:
hrt02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120754056 (SLC6A5)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
120754056
NCBI-ProteinID:
XP_039923124
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Position
6:62228472..62260714
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AA seq
769 aa
AA seq
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MSKQPVNNPEAVAPGHKEGAGVARISPENEPQNASARLPRSLSGDSKALPSEESKPNDLE
RTKVGICKLSSTPVQANSTLRRESEETFPCKPGPGQAAIPHCKIAALQSADAAPSLGKGT
LEQNNAWLTLSHSTVVLGTDGNTSVLPGRVEGEDDVGDENKARGNWSSKLDFILSMVGYA
VGLGNVWRFPYLAFKNGGGAFLIPYLMMLALAGIPIFFLEVSLGQFASQGPVSVWKAIPA
LQGCGIAMLIISVLIAIYYNIILCYTLFYLFASFVPVLPWASCSNPWNTPDCKDKNKLLL
DSCIIGDHPKIQIKNSTFCMSAYPNLTMVNFTREGNKTFVSGSEEYFKYFVLKISAGIEY
PGEIRWPLALSLFLAWVIVYASLAKGIKSSGKVVYFTATFPYVVLIILLIRGVTLPGAGD
GIWYFITPKWEKLIDAMVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTLIVTCT
NSATSIFAGFVIFSVIGFMANELKVNIEAVADQGPGIAFVVYPEALTRLPLSPFWAIIFF
LMLLTLGLDTMFATIETIVTSVSDEFPKYLRTHKALFTLGCCVSFFIMGFPMITQGGMYM
LQLVDTYAASYSLVIIAIFELVGVSYIYGLQRFCEDIEMMIGFQPSKFWRVCWAFVTPTI
LTFILCFSFYQWEPMTYGAYHYPGWSMVLGWLMLACSVIWIPVMFVIKMHLAPGKFIERL
KLVCSPQPDWGPFLAKHRGERYRNMMDPLGTSSLGLKLPVKDVELGTQC
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagccggtgaacaatcctgaagcggtggctccgggacacaaggaaggtgcg
ggagttgcgaggatcagccccgaaaatgagccgcagaacgcctcggccaggctgccccgc
tcgctctcgggcgacagcaaagctcttccctcggaagagtcgaaaccgaacgatttggag
aggaccaaagtcgggatctgcaagctcagcagcaccccggtgcaagccaactccaccctg
cggagggaatccgaggaaacctttccctgcaagcccggccccgggcaagccgcgatccct
cactgcaaaatcgccgctctgcagagcgcggacgccgctccgagcctgggaaagggcacg
ctggagcagaacaacgcctggctcaccctgagccacagcaccgtggtgctgggcacggac
ggcaacacttctgttcttcccggcagagtggagggggaagacgatgtgggggatgaaaac
aaagcccgagggaactggtccagcaagctggatttcatcctctccatggtgggttatgca
gtggggctgggcaatgtctggaggttcccgtacctggcctttaagaatgggggaggtgcg
ttcctcatcccctatttgatgatgttggctctagccgggatccccattttcttcctggaa
gtctccctggggcagtttgctagtcagggccccgtgtcggtctggaaagccatccccgcc
ttgcaaggctgcggcatcgccatgctgatcatctcggtgctgatcgccatctactacaac
atcatcctgtgctacacgctcttctacctgttcgcctccttcgtgcccgtgctgccctgg
gcgtcctgcagcaacccctggaacacgcccgactgtaaagacaaaaacaaactcctgctg
gattcctgcatcattggcgaccaccccaaaatacaaatcaagaactctactttctgtatg
agcgcctatccaaacctaaccatggtgaacttcacccgggaaggaaacaaaacattcgtc
agcggcagcgaagagtacttcaagtactttgtgttgaagatttcagcggggattgaatat
cccggtgagattagatggcccttggcactgtctcttttcctagcttgggtgatcgtttac
gcctcccttgctaaaggaatcaagtcgtcaggaaaagttgtgtacttcacagctacgttc
ccctacgtggttctcatcatccttctcataagaggagtgactctgccgggagctggagat
gggatctggtatttcatcacacccaagtgggagaagctgattgatgccatggtctggaag
gacgctgccactcagattttcttctccttatctgcagcatggggaggtctaattaccctc
tcatcatacaacaaattccataataactgctacagggacacgctgatagtcacgtgtacc
aacagtgccacgagcatcttcgcgggctttgtcatcttctcagtcattggcttcatggca
aacgaactcaaagtgaacattgaagccgtggcagaccaaggtcctgggattgcttttgtg
gtttacccagaagccttaaccaggctgcccctctctcccttctgggctatcatcttcttc
ttgatgcttctgactcttggattagacacgatgttcgccaccatcgagaccatcgtgacc
tccgtgtcggatgaattccccaagtacttaagaacgcacaaggcgctgttcaccctcggg
tgctgcgtgtccttcttcatcatgggatttcctatgatcactcagggtggaatgtacatg
ttgcagcttgtggacacttatgcagcctcttactctcttgtcattattgccatcttcgag
ctcgttggagtttcctacatctacgggctgcaaagattttgtgaagacatagaaatgatg
attggattccagccaagtaaattctggagagtctgttgggcatttgtgaccccaactatt
ttaacattcattctctgcttcagtttttaccagtgggaacccatgacctacggagcttac
cactacccaggctggtccatggtgctggggtggctgatgctggcctgctcagtcatctgg
atcccagttatgtttgtgataaaaatgcatctggccccgggaaaatttattgagcggctc
aagctggtgtgctccccacagcccgactggggccccttcctggccaagcaccgcggagaa
cgctacaggaacatgatggacccgctgggaacctcctccctgggactcaaactgccggtg
aaggacgtggagctgggcacccagtgctaa
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