Hirundo rustica (Barn swallow): 120754079
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Entry
120754079 CDS
T09369
Symbol
RTF1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120754079 (RTF1)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
120754079 (RTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
120754079
NCBI-ProteinID:
XP_039923180
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All DBs
Position
6:complement(38187269..38214698)
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AA seq
670 aa
AA seq
DB search
MVKKRKGRVLIDSDTEDSGSEENLDQELLSLAKRKRSDSEEKEPPVSKPTASSDSETSDS
DDEWTVGGSKNKKKGKAGKAEKKGAMKKQMNKAASSGSSDKDSSAESSAPEEGEVSDSES
NSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKR
RFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVMSHNKERRSKRDEKLDKKSQ
AMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRSSSSDEE
EEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVY
RVAEITGVVETAKVYQLGGTRTNKGLQLRHGSDSRVFRLEFVSNQEFTESEFMKWKEAMF
SAGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEK
AMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALV
AESHSMKNQQMDPFTRRQCKPTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKDMSKGQ
GKDKDVNSKSASDLSEDLFKVHDFDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNL
EDYKKRRGLI
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaagcggaaaggccgcgtccttatcgattccgacaccgaggacagcggcagc
gaggagaacctggaccaggagctcctgtcattggccaaacggaagcgcagtgactctgaa
gaaaaggaaccacctgtgagcaaacctacagcatcttcagactctgagacatcagacagt
gatgatgagtggactgttggaggttctaaaaacaaaaaaaagggaaaagcgggtaaggca
gagaagaaaggagccatgaagaaacagatgaacaaagctgcctcttccggcagctcagat
aaagacagctcggctgagagctcggctcctgaagagggagaagtctctgactcagaaagc
aacagctcctcatctagctcagattcagattcttcatctgaagatgaggagttccatgat
ggctatggagaagacctgatgggagatgaagaagaccgagctcgactggaacaaatgacg
gaaaaggagagagagcaggaactgtttaaccggatagaaaagagagaagtgctgaagaga
agatttgaaatcaagaaaaaactaaaaacggcaaaaaagaaagaaaagaaagagaaaaag
aaaaagcaagaggaagagcaggagaagaaaaaactcacacagatccaggagtcccaggtc
atgtcacataacaaagagcggagatcaaagcgggatgaaaagctagacaagaaatcccag
gcaatggaggaactaaaagcggaaagagagaaaaggaagaacagaacagctgaattgctt
gcaaaaaaacagccattaaaaactagtgaagtatactctgatgatgaagaggaggaggag
gatgataaatctagtgagaaaagtgatcgctcatccagatcgtcatcctctgatgaagag
gaagagaaagaagaaattcctcccaagtcccagccagtgtccttgcctgaagagctgaac
cgagtacggttgtcgcggcacaagctggaacgctggtgtcacatgcccttctttgccaag
acagtcactggctgctttgtccgtatcggcattggcaatcacaacagtaaacctgtgtat
cgggttgctgaaataactggtgtggtagagactgcaaaggtttaccaacttggtgggaca
cggacaaacaaaggactacagttgcggcatggcagtgattcacgtgtgtttcgcttggag
tttgtctcaaatcaggaatttactgaaagtgaatttatgaagtggaaggaagcaatgttc
tctgctgggatgcagctacccacactagatgagataaacaagaaggaagtgtccatcaaa
gaagccctcaactacaagtttaatgatcaggacattgaagagattgtgaaagagaaggaa
aggttcagaaaagcacctccaaattacgccatgaagaaaactcaactgttaaaggagaag
gctatggctgaggacttgggggaccaagataaggccaagcagattcaagatcagcttaat
gaacttgaagagagagcagaggccctggatcgtcaacgaacaaaaaatatttctgcaatc
agttacatcaaccagagaaatagagagtggaatatcgttgagtctgagaaggctcttgtg
gctgaaagtcacagcatgaaaaaccaacaaatggacccctttactaggcggcagtgcaag
cccacaatagtgtctaattccagagatcctgctgtccaagctgccatccttgcccagcta
aatgcaaaatatggatctggtgtgttaccagatgctccaaaggacatgagtaagggtcaa
ggaaaagataaagatgtgaactctaaatcagctagtgacctctcagaagatcttttcaaa
gtacatgactttgatgtaaagattgatcttcaggttcccagttcagaatctaaggcactg
gccatcacctccaaggctcctccagcaaaagatggtgcccctcggcgatcattgaacttg
gaggactacaaaaagagacgggggcttatttga
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