Hirundo rustica (Barn swallow): 120754146
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Entry
120754146 CDS
T09369
Symbol
SCFD1
Name
(RefSeq) sec1 family domain-containing protein 1 isoform X1
KO
K19998
sec1 family domain-containing protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120754146 (SCFD1)
Membrane trafficking [BR:
hrt04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
120754146 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120754146 (SCFD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
120754146
NCBI-ProteinID:
XP_039923357
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All DBs
Position
6:complement(35838043..35888919)
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AA seq
632 aa
AA seq
DB search
MAAGIREKQTVALKRMLNFNVPPVKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDAIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDI
ANAAIGANAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETIM
DTIVDSLFCFFVTLGAIPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQ
FSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESAGTESTPAGARPK
KKNKKSYDLTTSDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGIEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKSRKLDVYFEYEEKIMS
KSTLDKSLLDMISDPDAGTPEDKMRLFLIYYISSAQAPSEIDLEQYKKALMDAGCNLAPL
SYIKQWKAFTKMASAPTSYGNATPKPLGLFSRVMNTGSQFVMEGVKNLVLKQQNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLIDY
IKGKQGKHVLYGCSELFNATQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggatccgggagaagcagacagtggctttgaaacgtatgctgaacttcaat
gttcctcctgttaaaaacagcacaggagaaccggtatggaaggttctcatttatgacaga
tttggccaagatatcatctcaccattgctgtcagtgaaagaactcagagatatggggatc
actttgcatttgcttttgcattcagatcgcgatgctattccagatgttccagctgtttac
tttgtaatgccaacagaagaaaatattgacagaatgtgccaggatcttcgaaaccagctc
tatgagtcttattatttaaactttatttctgccatttcaagaagtaaactggaagatatt
gcaaatgctgctataggtgctaatgcagtaactcaagtggctaaggtgttcgatcaatat
cttaattttattactttagaagatgatatgtttgtgttgtgtaaccaaaacaaagaactt
gtttcatatcgtgccattaaccgaccagatataacagacacagaaatggaaactataatg
gacactattgttgatagcctcttctgtttttttgttacacttggcgctatacctataatc
agatgctcaagaggaactgcagctgaaatggtggcagtgaaattggataagaagctcaga
gagaacctaagagatgccagaaacagtctttttacaggtgacacacttggagctggccag
ttcagcttccaaaggcccttattagtccttgttgacagaaacatagatttagcaactcct
ctacatcatacttggacataccaagctttagtgcatgatgttctggatttccatttgaat
agagttaacttggaagaatcagcaggaacagaaagcactccagcaggtgctagacctaag
aaaaaaaataagaagtcctatgatttaactacatctgataaattctggcaaaagcataag
ggcagtccttttccagaggtggccgagtctgttcagcaggaactggaatcttacagagcc
caagaagatgaagtcaaaagacttaaaagtatcatgggcattgaaggagaggatgaagga
gcaataagtatgctttcagataatacagctaagctcacttcagctgtcagctctcttcca
gaacttctggaaaagaagaggctcattgatcttcatacaaatgttgcaacagctgttttg
gagcacataaagagtcgaaaactggatgtgtattttgaatatgaggaaaaaataatgagc
aaatctactttggataaatctcttctggatatgatttctgacccagatgcgggaactcct
gaagacaaaatgcgattatttctcatctattacataagctcagcgcaggcaccgtcagag
attgatttggagcagtataaaaaagcactgatggatgcaggttgtaatcttgctcctttg
agctacataaagcaatggaaggctttcactaagatggcttcagctccaaccagctatgga
aacgctacgcctaaacctttgggtctgttttcacgtgttatgaatacaggatcacagttt
gtaatggaaggagtgaagaacttagtactgaagcaacaaaacctgccagtcacacgtatt
ttggacaaccttatggagatgaagtcaaaccctgagacagatgactaccggtattttgat
cccaagatgctacgaggcagtgacagctcagttccaagaaataaaaatccattccaggag
gccatagtgtttgtagttggaggaggcaattatattgaatatcaaaatcttattgactac
ataaagggtaaacaaggcaaacatgtcctgtatggctgcagtgaactttttaatgctaca
cagtttataaaacagctgtcccaacttggccagaaataa
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