Hirundo rustica (Barn swallow): 120754175
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Entry
120754175 CDS
T09369
Symbol
SRSF5
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03040
Spliceosome
hrt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120754175 (SRSF5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120754175 (SRSF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120754175 (SRSF5)
Spliceosome [BR:
hrt03041
]
Common components
Common spliceosomal components
SR proteins
120754175 (SRSF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
DUF2202
Motif
Other DBs
NCBI-GeneID:
120754175
NCBI-ProteinID:
XP_039923431
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All DBs
Position
6:complement(30876856..30881368)
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AA seq
265 aa
AA seq
DB search
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
ELCSERVTIEHARARSRGRGRGRYSDRFSSRRLRSDRRNAPPLRTENRLIVENLSSRVSW
QDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIEGSK
RHSRSRSRSRSRSRSSSGSRSRSRSRSRKSYSRSRSRSHSKSRSVSRSPLPSKSQKRGSS
SRSKSPSSVDRQRSRSRSRSVDSRN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctgccgcgtcttcatcgggaggctgaacccggccgccagggagaaggatgtg
gagaggttcttcaaggggtacggccgcatccgcgatatcgacctgaagaggggtttcgga
ttcgtggagtttgaggatccgagggatgcagatgatgctgtctatgaattggacggaaaa
gaactttgcagtgagagggttactattgagcatgccagagcacgctcgaggggcagaggc
agagggaggtactctgaccggttcagtagccgtcgcctgcgcagtgacaggagaaatgcc
ccacctctaagaacagaaaatcgccttatagtggaaaatctgtcttcccgagtcagctgg
caggatctcaaagacttcatgagacaagccggggaagtaacctttgcagatgcacacaga
cctaagttaaatgaaggggtggttgaatttgcctcttacagtgatttaaagaatgctatt
gaaaagctttctggtaaagaaattaatggaaggaaaatcaaactaattgaaggcagcaaa
aggcacagtaggtccaggagcaggtcgcggtcgcgcagcaggagctcatccgggtcccgc
agccgctctcgttcccggagccgcaagtcctacagcaggtcacggagtaggagccatagc
aagtcacgatcagttagcagatctccgctgccaagcaagagccagaaacggggttcttcc
agcagatccaaatctccatcatctgtagatcggcagagatctagatcgaggtccagatct
gttgacagtcgcaactga
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