Hirundo rustica (Barn swallow): 120754216
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Entry
120754216 CDS
T09369
Name
(RefSeq) USP6 N-terminal-like protein
KO
K20133
USP6 N-terminal-like protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120754216
Membrane trafficking [BR:
hrt04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120754216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF1307
Motif
Other DBs
NCBI-GeneID:
120754216
NCBI-ProteinID:
XP_039923502
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All DBs
Position
6:45416924..45483728
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AA seq
789 aa
AA seq
DB search
MKKDIESLIAQEKAEIVAKYEKGRQEGVQIDQWEDADFTLYKVTDRFGFLHEQELPSRTA
LEEKQRQQEIERVDKWLKMLKKWGKYRNSDKMCRRVYKGIPLQVRGQVWSLLLDVDKMKK
ENEGKYEQMKERAKSSSSEIKQIDLDVNRTFRNHIMFRDRYGVKQQALFHVLSAYSVYNT
EVSYCQGMSQIAAILLMYLNEEDAFWALAQLLTNQRHAMHGFFIPGFPKLQRFQAHHEQI
LNKLFPKLKKHMDKEQMTTGIYTTKWFLQCFIDRTPFTLTLRLWDIYILEGERVLTAMAY
TILKLHKKRLLKMTLEDLREFLQEKIAASLQYEDDAVIEQLQVSMTELRKMKFDLPPPAK
PEEFPRKPLGLELSLNPVAIKENAAANGQNGRVSEHAADREPHSHGVPGAPGGMTVVEAR
IPTFQGSEAAEATNVLVPGGRPSDEEDQVQPIVDRQPSSLPKASETQAQQHLLPMVLLPE
QPLLAPGCAVVGRGVSRQAPAEYSSLDSSLQDRPAPPVSSTAELSAPDQAAWQPNPSAPP
AEEQAPSLSRDAVLEAAPHPVPASCQQLSCTSHSDGSPESERGEEAGDDRHRRAVLPDQP
GLKRSTSKAASTGELLSLQHNGLGSATGPTRWPEAVGALPTHRQAGGSVPVLSRREPEAA
GLAESCPAQRAPSPVVEGNSPYVVIKTTTPLHLAHATEQDFLNRKQVALPLSETGRAPPT
ASVLPPLTPDSEEVEVQKSLQKPLNALKAPRPPLSPKPKLPPQVAKSRSENSFLSGSPSL
AKLPKSVTF
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggatatagagtctttaatagcccaggaaaaagcagaaatcgtcgccaagtat
gagaagggcagacaggaaggagttcagattgaccagtgggaagatgctgatttcacactc
tacaaagttacagaccggtttggattcctgcacgagcaggagctgccatcccgcaccgcc
ttggaggagaagcaaagacagcaggaaatagaacgtgtggacaagtggcttaagatgctg
aagaaatggggcaaatacagaaacagtgacaagatgtgccggcgtgtgtacaaagggatc
ccgcttcaggtgcgaggccaggtctggtcacttctgctggatgtcgacaagatgaagaag
gagaatgaaggaaaatatgagcaaatgaaagaacgagccaagagttcttcatcggaaatc
aagcagatcgatttggacgttaaccgcaccttccgaaaccacatcatgtttcgggatcgc
tacggtgtgaagcagcaggcactcttccatgtcctgtcagcatactcagtttataacact
gaagtgagctactgccaagggatgagccagattgcagccatcctcctgatgtacttgaac
gaagaggatgcgttctgggcgctggcacagctgctcaccaaccagcgccacgccatgcat
ggttttttcattcctgggttcccgaagctgcagaggtttcaagcccaccacgagcaaatt
ttaaacaaactgttccccaaactgaagaagcacatggacaaggagcagatgactaccggg
atttacacaaccaagtggttcctgcagtgtttcattgaccggaccccattcactctgacc
ttgcggctgtgggatatctacatcctggaaggggagcgggtgctgacagccatggcttac
accatcctcaaactgcacaaaaagcgtctgctgaagatgacactggaagatttacgtgaa
tttctgcaggagaaaatcgctgcttccctgcagtacgaggacgacgctgtcattgagcag
ctgcaggtgtcaatgactgaactgcgcaagatgaaatttgacctgcccccgccagcaaag
cctgaggagtttccaaggaaacccctgggcctggagctctccctcaacccagtagccata
aaggaaaacgcagcggccaatggccagaacggccgggtgagcgagcacgctgcagacagg
gagccccattcccacggagttcctggcgcaccaggaggaatgacagtggtggaagcgagg
attcccaccttccagggtagtgaagcagctgaagcaacgaatgtgcttgttccgggtggg
cggccatcggatgaggaggatcaggtgcagcccatcgtggacaggcagccatcatctctt
ccgaaggcaagcgagacacaggcccagcaacacctcctgcccatggtcctgcttccagag
cagcctcttcttgcccctggctgtgccgtggtgggccgtggagtctcccgccaggcccca
gctgagtacagctccttagactcctctctccaagacagaccggctcctcctgtctccagc
actgctgagctttctgctccagaccaggcagcgtggcagccaaatcccagtgccccgccg
gcagaagaacaggcaccttccctgagcagagacgcagtgctcgaagcagccccccatcct
gtgccagccagctgccagcagctctcctgcacgtcacacagcgatggctcccccgagagc
gagcgcggggaggaggcgggggatgacaggcaccgcagggcggtgctgccggaccaaccg
ggcctgaagcgctcgacatccaaagctgcatccacaggagagctcctcagcctgcagcac
aacgggctgggcagcgccaccggccccacgcgctggcccgaggccgtgggcgcgctgccc
acgcacaggcaggcggggggcagcgtgcccgtcttgtcccgcagagagccggaggcggcg
gggctggccgagagctgccccgcccagcgggcaccgtcccctgtggtggaagggaacagc
ccctacgtcgttatcaaaaccaccactcccctccacctggcccatgcgacagagcaggac
ttcttgaacagaaagcaggtggcattgcctctgtcagagactggacgtgccccgcctacc
gcctccgtgctgccacctcttacgccggactcagaggaggtagaggttcagaaaagcctt
cagaaaccgttaaatgcactgaaagccccacgacccccgctgagccccaaaccaaaatta
ccgccgcaggttgccaaatcccgctcagagaacagtttcctttcaggctctccttccctg
gcaaagctgcccaaatcggtgacgttctag
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