Hirundo rustica (Barn swallow): 120754340
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Entry
120754340 CDS
T09369
Symbol
NOVA1
Name
(RefSeq) RNA-binding protein Nova-1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120754340 (NOVA1)
Spliceosome [BR:
hrt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120754340 (NOVA1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
120754340
NCBI-ProteinID:
XP_039923743
LinkDB
All DBs
Position
6:37217121..37361386
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AA seq
507 aa
AA seq
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MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA
AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI
REMPQDVAKTEPVSILQPRTTVNPDRIKRTLPSSPTTTKSSPSDPMATSRANQVKIIVPN
STAGLIIGKGGATAKAIMEQSGAWVQLSQKPDGISLQERVVTVSGEPEQNRKAVELLIQK
IQEDPRSGGCLHISYANVTGPVANSNPTGSPHANTAEVLPTAAAAAGLLGHANLAGVAAF
PAVLSGLTGNDLAAVASALNPFASYGYNLNPLGLGLSQAAATGALAAAAASANPAAAAAN
LLATCASEASASGSTAGGTAGTFALGSLAAATAATHGYFGAASPLAAGAILGTEKSTDGS
RDVVEIAAPENFVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTVTGTPAA
TQAARYLITRRITYEQGVRAADPQKVG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcagctcccatccagcagaacgggacccacaccggggttcccatagacctg
gacccgccggactcccggaaaagaccgcttgaagccccccctgaagccggcagcaccaag
aggaccaacacgggcgaggatggccagtattttctaaaggtcctcatacctagttatgct
gctggatctataattgggaagggaggacagacaattgttcagttgcagaaagagactggg
gccaccatcaagctgtctaaatccaaagatttttatccaggtactacagagcgggtgtgt
ctgatccagggaacagtcgaagcactaaatgcagttcatggcttcattgcagagaagatt
cgagaaatgcctcaggatgtggccaagacagagcctgtcagcattctacagcctcggacc
actgttaacccagaccgcatcaaacgaacattgccatcttccccaactaccaccaagtcc
tctccgtctgatcccatggccacctccagagccaatcaggtaaagattatagttcccaac
agcacagcaggtctgataatagggaagggaggtgctacagcgaaggctataatggagcag
tcaggggcttgggtgcagctttcccagaaacctgatgggatcagcttgcaagagagggtt
gtcactgtgagtggagaacccgaacaaaaccgaaaagctgttgaacttctcatccagaag
atacaagaggatccacggagtggcggctgtctccatatcagttacgccaatgtcacgggt
ccagtggccaattccaatccaaccggatctcctcatgcaaacactgctgaagtgttacca
actgctgcagctgctgcagggctgttaggacatgccaaccttgctggagtggcagccttt
ccagcagttttatctggcttgacaggcaatgacctggcggccgtcgcctctgcacttaat
ccattcgccagctacggatataacctcaatccattaggtttaggcctaagtcaggcagca
gctacaggggctttggctgcagcagctgccagcgccaacccagcagcagcagcggccaat
ttgttggccacctgtgcgagtgaagcctcagccagtggcagcaccgctggcggtacggcg
gggacatttgcgttaggcagcctggctgctgctactgctgcaactcatggatattttgga
gctgcttctcccctagctgccggtgccatcctaggaacagaaaaatccacagatggatca
agggatgtagttgaaatagcagcgccagaaaacttcgttggtgcaatacttggaaaagga
gggaaaacattagtcgaataccaggagttgactggtgcgaggatacagatctctaaaaag
ggagaattcgtacctggcacaagaaatcgcaaggtaaccgttactggaacaccagctgca
acccaggccgcacggtatttaattacacgacggatcacgtatgagcaaggagttcgggct
gccgatccacagaaagtgggttga
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