Hirundo rustica (Barn swallow): 120754347
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Entry
120754347 CDS
T09369
Symbol
PSEN1
Name
(RefSeq) presenilin-1 isoform X1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04310
Wnt signaling pathway
hrt04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120754347 (PSEN1)
04330 Notch signaling pathway
120754347 (PSEN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrt01002
]
120754347 (PSEN1)
Peptidases and inhibitors [BR:
hrt01002
]
Aspartic peptidases
Family A22: presenilin family
120754347 (PSEN1)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
LRRC37AB_C
Motif
Other DBs
NCBI-GeneID:
120754347
NCBI-ProteinID:
XP_039923750
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Position
6:complement(29187102..29210565)
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AA seq
467 aa
AA seq
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MTELSAHLPQFQHGQLTENFPDTHLSNTNDNSERRRHDNSERRRNDNAESETNGQPQNNV
QQVVEQDEEEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTRKDGQLIYTPFT
EETETVGQRALNSILNAAIMISVIIVMTILLVVLYKYRCYKVIHGWLIISSLLLLFFFSF
IYLGEVFKTYNVAMDYITVALMIWNFGVVGMICIHWKGPLRLQQAYLIMISALMALVFIK
YLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSSTMIWLVNMA
EEDPEAQRKSKHSSYDKQAPASRPQNQDAEADDGGFSQEWQQQRDNRIGPIESTPESRAA
VQALPSNSQTSEDPEERGVKLGLGDFIFYSVLVGKASATASGDWNTTLACFVAILIGLCL
TLLLLAIFKKALPALPISITFGLVFYFATDNLVQPFMDQLAFHQFYI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacagagctgtctgcgcatttaccccagtttcagcatgggcagctgacagaaaacttc
cctgatacccacctcagcaacactaatgacaacagtgaaagacgtcgccatgataatagt
gagcgcagaagaaacgacaatgccgagtctgagactaatgggcagccacagaacaacgtt
cagcaggtggtggagcaagatgaagaagaagatgaagagttaacactgaaatatggggca
aaacatgtgattatgctgtttgtgcctgtcacgctttgcatggtggttgttgttgcaact
atcaagtctgtcagcttttatacacgcaaggatggacagctcatctacactcctttcaca
gaagagacagagacagtaggacagagagccctgaattctattctcaatgcagccatcatg
atcagcgtcatcatcgtcatgaccatcctcctggttgtgctttacaaatacaggtgctac
aaggtgattcatggttggcttatcatttcttctcttttgctgcttttctttttctcattc
atctacctgggcgaggtttttaagacgtacaatgttgccatggactacattacagtggca
ctcatgatttggaacttcggtgttgtgggaatgatttgtatccattggaagggtccactt
cggctccagcaggcatatctcattatgataagcgctctcatggccttggtgttcattaaa
taccttcctgaatggactgcatggctcatcctggctgtcatttcagtgtatgatttggtt
gctgtcctgtgtcctaaaggtccccttcgcatgttagttgaaacagctcaagagagaaat
gaaactctctttccagcacttatttactcttcaacgatgatatggcttgtgaacatggct
gaggaggatccagaagcccaacggaaatccaaacactccagttatgataagcaagctcca
gcaagccggccccagaatcaagatgctgaagcagatgatggcggctttagtcaggaatgg
cagcaacaaagggacaacagaataggacccattgaatcaacacctgaatcacgagctgct
gttcaggctctacccagtaactctcaaacaagtgaagaccctgaagaacgaggagtaaag
ctcggtttaggagacttcattttctacagtgtcctcgttggcaaagcctctgcaacagca
agcggggactggaatacaactttagcatgttttgtagccatattaattggtctgtgcctt
acacttctgcttcttgccatctttaagaaggccttaccagctcttccaatctccataacc
tttgggctagttttttactttgctacagataacttggtgcaaccctttatggaccagcta
gcatttcatcagttttatatctag
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