Hirundo rustica (Barn swallow): 120754416
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Entry
120754416 CDS
T09369
Symbol
MYOM1
Name
(RefSeq) myomesin-1 isoform X4
KO
K24495
myomesin
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120754416 (MYOM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120754416 (MYOM1)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120754416 (MYOM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
V-set
C2-set_2
Ig_CD22
Ig_J_second
C2-set_3
Motif
Other DBs
NCBI-GeneID:
120754416
NCBI-ProteinID:
XP_039923916
LinkDB
All DBs
Position
1:complement(49807456..49880665)
Genome browser
AA seq
1687 aa
AA seq
DB search
MMSLPFYQRHHEHYDRAYRHKALSSTVSQYQKETKSKSAVYAQGSAAYARGSAAYRHSSA
AGFSLDSSAAYSHGSSAYDLESAAYSYGSAAYDRSAAQSKRSAAYSLDSESLSTSSAAYS
HASESINKLAAAYRLGSEAYSVGLKNSNLMIEDQSYKMSPKAKRAKQSLISEDKENEALD
YSVPIFTGREVNISGITDTEEERIKESAAYVAKRNLFATGEGVSVSKVAKTTSEEKHHEK
KSRKVAIRESAEHVAMRKTLEETQAFHKKLNKDKLLHAPEFIIEPRSHTIWEKENVRFNC
SVAGWPEPRVTWYKNNVPIDVQAHPGKYIIQSRYGLHSLEITECDFDDTAQYHASALNVK
GEVSVYASLVVKRYKGEIDASLLHGRNLSPSPFAVTPHGYASRFEISFVDKFDVAFGREG
ETMSLGCTVVINPDIKRFKPDIEWYRNGVLITPSKWVQMQWSGERASLTLTHANKEDEGL
YTLRVAMGEYYEEYSGYVFVRDADAEIPGAPGAPLDVQCLDANKDYVIVSWKQPAVDGGN
PILGYFIDRCEVGTSHWTQCNENPVKFARFPVTGLIEGRSYIFRVRAVNKAGVSLPSRVS
EPVAALDPADRARLRGHPSAPWTGQIIVTEEEPAEGVVPGPPTDLQVIEATKNYVVLSWK
PPGQRGHEGIMYFVEKCVAGTEDWQRVNTEIPVKSPRFAVFDLSEGKSYCFRVRCCNSAG
IGEPSEATEATVVDDKLDIPKAPGRIMPTRNTDTSVVVTWTEPPDAKELVGYYIESSVEG
SGRWEPCNNNPVKGTRFICHGLSNGEKYIFRVRAVNAAGLSEFSQESEPIEVKAAIGGEL
LHAAPSPPYDIVVLESVRDSMVLGWKQPEAIGGTEITGYYVNYREVVDGVPGKWKEANIK
AVTERAYRIQNLKENMVYQFQVAAANLAGVGTPSKPSKPFKCEEWTIAVPGPPHDVKCTE
VRKDSLVLLWKEPVYSGRSPIVGYYVDMKESKAKEEHWRSVNEKPLQKKFLKIGGLTEGV
SYVFRVRATNQAGVGKPSDVTDAVTAETRPGTKEVVVDVDDNGVISLNFECDQMSPDSKF
IWSKNYEPIEDDPRLNIDTKGGKSKLSFKDLGEDDLGIYSCIVTDTDGASSSYTIDEEEM
KRLLALSHERQFPTVPLTSELAVEILEKGEVRFWLQAEKLSGNAKANFVFNDKEIFNGEK
YKMKVNHNTGLVEMIMDKLEEKDEGTYTFQLQDGKATNQSSLVLIGDVFKKLRDEADFQR
KEWHRKQGPHFVDKLGWEVTDECNVLLKCKVANIKKETHIVWYKDDREIMVDEEHDFKDG
VCTLLISEFSKKDAGTYEVILKDDRGKDSSELKLKDTAFADLMNEVCRRIALSATDLKIQ
STAEGIRLYSYVTYYVEDLRVGWVHNDTQIKFTDRMRTGVTGEQIWLQINEPTPQDKGRY
IMELFDGNTTHKKTVDLSGQAFDEAFAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKA
LNLSCTVWGDPTPEVSWLKNEKSFVSDANCTLKFESGKNVSFSISTVSTQDSGKYSIVVK
NKYGTETSDVTVIVMPVSGQTDTVQGHNQSNKTVSKKKKAMTASKQKEEGKKDFIKPHIE
EITATEETPDPNEIPPVETEKDTKSNQQAAKKTAGKAGVAEKVPQPTESLDRQGKKPPEK
AALGKPH
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctttaccgttctaccaaagacaccacgagcactatgaccgtgcgtaccgccac
aaagcgctgtcgtccactgtgagccagtaccaaaaggagacaaagagcaagtctgctgtc
tatgctcaaggatctgcagcttatgccaggggctccgcagcctatcgccactcctctgca
gcaggcttcagccttgactcctcagcagcttacagccatggctcttcagcctacgacctc
gagtcggcagcctacagctatggatccgctgcctacgaccgctctgctgcgcagagtaag
agatccgctgcctacagcctggactctgagtccctcagcaccagctcagctgcctacagc
catgcatctgagtccatcaacaagctggctgcagcctacaggctgggatctgaagcctac
agtgttggactgaaaaattccaacttaatgatagaagatcaatcctataagatgagtccc
aaagcaaagagagcaaaacagagtttgatatcagaggacaaagagaacgaagccttagac
tactcagtgcctatattcacaggacgagaagtgaacatcagtggtatcacagacactgaa
gaagagagaattaaagaaagtgctgcgtatgttgccaagaggaacctttttgccacaggg
gaaggagtcagtgtcagcaaggtggccaagacaacttctgaagagaaacatcatgaaaaa
aaatcaaggaaagtggcgatccgggagtctgctgaacatgtagccatgaggaaaacgcta
gaagagactcaggcattccataaaaagttgaataaagataaactcttacatgctcctgag
tttatcattgagcctcgttcccacactatctgggaaaaggaaaatgttagatttaattgt
tcggtggctggctggcctgaaccccgtgttacatggtacaaaaacaacgtgcccattgat
gtacaggctcaccctggcaagtatatcattcaaagtcgatatgggctgcactccctggag
attaccgagtgtgactttgatgacactgcccagtatcatgcttctgctctgaatgttaaa
ggagaagtttcagtttatgcttcccttgtggtaaagaggtacaaaggagaaatcgatgca
agtcttttgcatggtagaaatctttccccctctccatttgctgttacccctcatggctat
gcttccaggtttgaaatcagctttgttgacaagtttgatgtggcctttgggagagaaggc
gaaacaatgagtctgggctgcacagttgtcatcaatcctgatatcaagcgcttcaaacca
gacattgagtggtacagaaacggtgttcttattacaccatccaaatgggtgcagatgcag
tggagcggggagcgagcttctttaacactgactcatgcaaacaaggaggatgaaggtctt
tacacgctacgagtggcgatgggagagtactatgaagagtacagcggttatgtctttgtg
cgagatgctgatgctgaaatccctggagcccctggtgcaccactggatgtgcagtgctta
gatgccaacaaagattatgtcattgtctcctggaagcaacccgctgtcgatggaggaaac
cccatccttggatatttcattgacaggtgtgaggttggcacctcccactggacccagtgc
aatgagaatcccgtgaagtttgctcgttttcctgtcactggtctgattgaaggccgttcc
tatattttccgagtccgagctgtgaacaaagctggtgtcagcctgccctcccgggtgtca
gagcctgtggctgctctggatcctgcagacagagccaggcttagaggtcacccttctgct
ccttggactggacagattattgtgactgaggaagaacctgcagagggtgttgttcctggc
ccccccacagacctccaagttattgaggccaccaagaattatgttgtgcttagctggaaa
cctccaggacagcggggccacgagggtatcatgtactttgtggagaagtgtgttgctggc
acagaggactggcaaagggtgaacaccgagatccctgtgaagtcccctcgctttgcagtc
tttgatttgtctgaagggaaatcctactgcttccgagtccgctgctgcaattcagctgga
attggtgaaccctcagaagcaactgaagccactgtggtggatgacaaactggatattccc
aaggctcctggccgtattatgccaactaggaatacagatacttcagttgttgtcacttgg
acagagcccccagatgccaaggagctggttgggtactacatcgagtcaagtgtggaagga
tctggtcgttgggaaccgtgcaataacaacccagtgaaaggcacaaggttcatttgccat
gggctcagcaatggtgagaagtacattttcagagtcagagctgttaatgcagcggggctc
agtgaattttcacaggaatcagagcctatagaggtgaaagcagccattgggggagaattg
cttcatgctgctccatccccaccttatgacatcgtggtactcgagagcgtccgtgactcg
atggtactggggtggaaacaacccgaagccattggtggaactgaaattaccggctactac
gtgaactatagggaagtggttgatggagttcctgggaagtggaaggaggccaacataaag
gctgttactgagagggcatacaggatccaaaacctgaaggaaaacatggtgtaccagttc
caggtggctgctgctaacctggcaggggttggaacaccctccaaacccagcaagcccttc
aaatgcgaagagtggaccattgctgtgcctgggccaccccatgatgtcaaatgcacagaa
gttaggaaggactccctggttttactgtggaaggagccagtttattctggtcgcagtccc
atagttggttattatgttgatatgaaggaaagtaaagcaaaggaggaacactggagaagt
gtcaatgagaagccacttcaaaagaaattcttgaagattggtggcctgacagaaggtgtg
agctacgtgtttcgtgtgcgggcaacaaaccaggctggcgttgggaaaccgtcagatgtc
acagatgctgtcacagctgaaacacgaccaggaaccaaggaagtggtagttgatgtagat
gacaatggagtaatttccttgaactttgaatgtgatcagatgtctccagactctaagttc
atttggtccaagaattatgaaccaattgaggatgatcctcgactgaacatcgatacaaaa
ggcggaaagtcaaaactctcctttaaggatcttggagaagatgatttgggaatttactct
tgtattgttacagacactgatggagcttcgtcaagctacacaattgatgaggaagaaatg
aaacgcctgcttgctctgagccatgaacgccaatttccaactgtcccacttacctctgag
ttggcagtggaaatcttggaaaaaggagaagtgagattctggctgcaagctgaaaaactg
tccggcaatgcaaaggccaactttgtatttaatgataaggagattttcaatggagagaaa
tataaaatgaaggtgaaccacaataccggccttgttgaaatgattatggataaacttgag
gaaaaggatgaaggcacttacacattccagctgcaggatggaaaagcaaccaatcaatct
agtcttgtcctcattggtgatgtattcaagaagctacgggatgaagcagatttccagaga
aaagagtggcacaggaaacaaggtcctcattttgtggataaactgggatgggaagttacc
gatgagtgtaatgtgttgttgaaatgtaaggtggctaatattaagaaggaaacacacatt
gtgtggtacaaagatgacagggagataatggtagatgaagaacatgactttaaggatggc
gtgtgcactctgctgatatcagagttttctaagaaagatgctggcacttatgaagtcata
ctgaaggatgacagaggaaaggactccagtgagctgaagctcaaggacacagcttttgca
gatctgatgaatgaagtatgcagaaggattgctttatctgcaacagacctgaaaatccag
agcacagctgagggtatcagactgtactcctatgttacttattatgtggaagatttgaga
gtaggctgggtgcacaatgatacccagattaagttcacagaccgaatgaggactggtgtc
accggggagcagatctggttgcagatcaatgagccaactccacaggacaaaggcagatac
ataatggagctctttgatggcaacacaacgcacaaaaagacagtggatctgtctggacaa
gcatttgatgaagcctttgctgagttccagagactaaagcaagctgccattgcggagaaa
aatcgcgcacgggtacttggaggtttgcccgatgttgtcaccatccaggagggcaaggca
cttaatctttcttgcactgtctggggagatcccaccccagaggtttcatggctgaagaat
gaaaaatcatttgtatcagatgccaattgcaccctgaagtttgaatctggaaaaaatgtc
agcttttccatttctactgtgtccacacaagactctgggaaatacagcattgtggtgaag
aacaagtacggtacagagaccagcgacgtcaccgtgattgtgatgcctgtgtcagggcag
actgacacagtccaaggacacaatcaaagtaataaaactgtatctaaaaagaaaaaagca
atgacagcaagcaaacagaaggaagagggaaagaaagattttattaagccacacatagaa
gaaattactgctacagaagagacacctgatccaaatgaaataccccctgtggaaacagaa
aaggatacaaaaagcaaccagcaagcagcaaagaagactgctggaaaggcaggagtagca
gaaaaggttcctcaacccacagaaagcttggataggcagggaaagaaaccaccagaaaaa
gcagccttgggaaaaccccactga
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integrated database retrieval system