Hirundo rustica (Barn swallow): 120754472
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Entry
120754472 CDS
T09369
Symbol
BMAL1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120754472 (BMAL1)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120754472 (BMAL1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
120754472
NCBI-ProteinID:
XP_039924002
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Position
6:57967262..58015162
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AA seq
633 aa
AA seq
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MADQRMDISSTISDFMSPDPADLISSSLSTSGMDCNRKRKGSSTDYQLDGFPFEEGMDTD
KDDQHGRLEYADQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPANGEIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSCYEYFHQDDIAHLAECHRQVLQTREKITTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVSTTVLDSGDAAFPQLAASPHSMDSVLQAGEGG
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDTS
SPGGKKILNGGTPDISSAGLLSGQIQDNSGYPYSDNSSILGENSHIGMDMIDTEQGSSSP
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaaggatggacatatcttctacaattagtgactttatgtcaccagaccct
gctgacttgatctccagttcccttagcacttcaggaatggactgtaataggaaaagaaag
ggaagctcaacagattatcaactcgatggctttccttttgaggaaggtatggatacagat
aaagatgaccaacatggaagattggagtatgcagaccaacaaggcaggataaaaaatgca
agggaggctcacagccagatcgagaagaggcgcagggataagatgaacagtttcatagac
gagctggcctcgctggtgcccacgtgcaacgccatgtcccgcaagctggacaagctcacc
gtgctcaggatggctgtccagcacatgaaaacacttcgtggtgctacaaacccatataca
gaagcaaactacaagcctgcttttctatcagatgatgaattaaaacatcttattctcagg
gcagcagatggatttctttttgttgtgggctgtgacagaggaaagatactgtttgtttca
gaatctgtcttcaagatcctcaactacagtcagaatgatttgattggtcaaagtttattt
gattatctccatcctaaagacattgccaaagtgaaggagcagctctcttcttctgacact
gcgccacgagaaagactcatagatgcaaaaaccgggctcccggtcaagacggacatcacg
cccgggccctcgcggctctgctccggagcacggcgctccttcttctgcaggatgaagtgc
aacaggccctctgtcaaggtagaagacaaggatttcccttcaacctgctcaaagaagaaa
gcagaccgcaaaagcttctgcactattcacagcacaggctacttaaaaagctggcctccc
acaaagatgggcctggatgaagataacgagccagataacgagggctgcaatttaagctgc
ctcgttgccatcgggaggctccatccccacgtggtgccgcagccggccaacggcgagatc
cgcgtgaagcccacggaatacgtgtcccggcacgccatcgacggcaaattcgtctttgta
gatcagagggcaacagccatcctggcatacttaccccaggaacttctaggtacttcgtgt
tacgaatattttcatcaagacgatatagcacatcttgcagaatgtcacagacaagttttg
cagacaagagaaaaaattacaactaactgctacaagtttaaaataaaagatggctctttt
attacgttgcggagtcgctggttcagtttcatgaacccttggaccaaagaagtagaatac
attgtctccacaaacacagtggtttccaccacggtcctggacagcggggacgcggccttt
ccgcagctggcagcgtccccacacagcatggacagcgtgctccaggctggggaaggtggc
cctaaaaggacccatcctactgtgcctggaattccaggtggaacaagagccggggcaggt
aaaatagggaggatgattgctgaagaaatcatggagattcacaggataagaggatcatca
ccttccagctgtggctccagtcccctgaacatcaccagcacccccccgcccgacacatcc
tccccaggagggaagaagatcttgaatggtggcactccagacatttcttcagctgggctg
ctgtccgggcaaatccaggataattctggctacccatattccgacaactcctcgatcctg
ggggagaactcccacatcggcatggacatgatcgacacggagcagggctccagcagcccc
agcaacgacgaggcggccatggccgtcatcatgagcctgctggaggccgacgcggggctc
ggcggccccgtggacttcagcgacctgccctggcccttgtaa
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