Hirundo rustica (Barn swallow): 120754500
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Entry
120754500 CDS
T09369
Symbol
GTF2A1
Name
(RefSeq) transcription initiation factor IIA subunit 1 isoform X1
KO
K03122
transcription initiation factor TFIIA large subunit
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120754500 (GTF2A1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120754500 (GTF2A1)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
120754500 (GTF2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
Motif
Other DBs
NCBI-GeneID:
120754500
NCBI-ProteinID:
XP_039924082
LinkDB
All DBs
Position
6:20522562..20549065
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AA seq
376 aa
AA seq
DB search
MASSTNTNPVPKLYRSVIEDVINDVREVFLDEGVDEQVLMELKTLWENKLMQSKAVDGFH
SEEQQLLLQVQQQQQQQQQQQHHHHHHHTPQPQQTVQQQSQPQQVLIPASQQAAQQQVIV
PDSKLIPHMNASGMSAAATAATLALPAGVTPVQQILTNSGQILQVVRTANGAQYIIQPQQ
PVVLQQQVIPQMQPGGVQAPVIQQVLAPLPGGISPQTGVIIQPQQILFTGNKTQVIPTTV
AAPTPAQAQIPATGQQQPQQQQAQPQAPLVLQVDGTGDTSSEEEDDEEEEYDDDEEEEKE
KDGGEDGQVEEEPLNSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNL
NGRDYVFSKAIGDAEW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcgactaacacaaaccccgtgcctaaattgtacaggtctgtaattgaagat
gtcattaatgatgtcagagaagtttttctggatgaaggagtggatgaacaagttctcatg
gaactcaaaacactgtgggagaacaagctgatgcagtctaaggctgtagatggcttccat
tcagaagagcagcagcttttattgcaggtgcaacaacagcaacagcagcagcagcaacag
cagcatcatcaccaccaccatcacacacctcagccgcagcagactgtacagcaacagtct
cagccacagcaggtccttattccagcatctcagcaagcagctcagcagcaggtcattgtg
ccagattccaagctgataccacatatgaatgcatcaggcatgagtgctgcagccactgcg
gctacattggctctccctgctggtgttactccagttcagcagatacttacaaattcaggc
cagattctccaagtagttagaactgcaaatggagctcagtatattattcaaccgcagcag
ccagtggttctacagcagcaggttataccccaaatgcagcctggtggagtacaagcacct
gttattcagcaggttttggctcctctccctggagggatttccccacagacaggagtgatt
attcagcctcagcagatcctgtttacaggaaacaaaactcaagttatacctacaacagtg
gctgctcctacaccagctcaagcacagattcctgcaactggtcagcagcagccgcagcaa
caacaggcacaaccacaagcaccacttgttctccaagttgatggaacaggggacacatca
tctgaagaagaagatgatgaggaagaagagtatgatgatgatgaagaggaagagaaggaa
aaagatgggggtgaagatggccaagttgaagaggagcctctgaacagtgaagatgatgtg
agtgatgaggaaggacaagaactgttcgatacagaaaatgttgttgtgtgccagtatgat
aagatacacagaagtaaaaacaaatggaaattccatctcaaagatggcatcatgaatctt
aatggaagagattatgtattttccaaagccattggggacgcagaatggtga
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