Hirundo rustica (Barn swallow): 120754563
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Entry
120754563 CDS
T09369
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120754563 (LRRC4C)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
ig
Ig_3
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRR_LRWD1
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
120754563
NCBI-ProteinID:
XP_039924255
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Position
6:42389188..42897569
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AA seq
638 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVT
NWETINMTTSLTPQSTRSTEKTFTIPVTDANNGIPGIDEVMKTTKIIIGCFVAITLMAAV
MLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYK
SPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgttggctcttcagcttcttgtggtggctggt
ctagtaagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagtaaggtg
atttgtgtacggaaaaatcttagagacgtgccagacggcatctccaccaacacccggcta
ctcaatctccatgagaaccagatccaaatcattaaagttaatagcttcaaacatctgagg
cacctagaaatcctgcagctcagcaggaatcacatcagaacaattgaaataggggctttc
aatggtctggccaatctcaacactttggaactctttgacaatcgtctgaccactatccca
aatggggcttttgtatacctgtcaaaactgaaggaactgtggttgagaaacaaccccatt
gagagcatcccttcttatgcttttaacagaatcccttctctccggaggttggatttgggg
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaaccttgccatgtgcaatcttcgagagattcctaaccttactccactagtaaaa
ctggatgagttagatctttctgggaatcacctgactgccatccggccaggttctttccaa
gggttaatgcatcttcagaaattgtggatgatacagtcccagattcaagtgatagaaagg
aatgcttttgataatcttcagtcacttgtagagatcaacctggcacacaacaatctaaca
ctactgcctcatgacctgttcacaccactccgcctagagaggatccacttgcatcacaat
ccttggaactgcaactgtgatatcctttggctcagctggtggattaaagacaaggcaccc
tccaatactgcatgctgtgcccgttgccacacgcctcccagtttaaaaggaaggtacatt
ggtgagctggacctgaattacttcacatgttatgctccagtcatagtggagccaccagca
gacctcaacgtcacagaaggcatggctgcagagatgaaatgccgggcatcgacctccctg
acctccgtatcttggattactccaaatggatctgtaatgacgcatggggcatacagagtt
cggattgctgtgctcagtgatggcacattaaattttacaaaagtaactgtgcaagacacg
ggtttgtacacgtgcatggtgagtaactctgttgggaataccacggcttctgccacgctg
aatgtgaccgccctggataaccctggttacacgtacttttcaaccgtcacggtagagact
gtggaaccttctcaggatgaggcgcagaccacagagcaggttgggcccacaccagttacc
aactgggaaaccattaacatgacaacctcactcactccacagagcacaagatcaacagaa
aaaacattcaccattcctgtgacggacgcaaacaatgggatcccaggaatagatgaggtt
atgaagactaccaaaatcataattggttgttttgtggctatcactctcatggctgctgtg
atgctcgtaattttctacaaaatgaggaagcagcatcaccggcagaaccatcatgctcca
acacggactgtagagatcattaatgtggatgatgagcttacaggtgacacacccatagag
agtcatttgcccatgccagcaatagagcatgagcacttaaatcactataactcttataaa
tctcctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcat
gaaccgttattgatccgaatgaactcaaaagacaatgttcaagagactcaaatctaa
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