Hirundo rustica (Barn swallow): 120754633
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Entry
120754633 CDS
T09369
Symbol
SNW1
Name
(RefSeq) SNW domain-containing protein 1 isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03040
Spliceosome
hrt04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120754633 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120754633 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120754633 (SNW1)
Spliceosome [BR:
hrt03041
]
Complex B
Other components
Prp19-related factors
120754633 (SNW1)
Complex C
120754633 (SNW1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
SIR4_SID
Motif
Other DBs
NCBI-GeneID:
120754633
NCBI-ProteinID:
XP_039924391
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Position
6:22033464..22049449
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AA seq
568 aa
AA seq
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MALTSFLPAPTQLSQDQLELEERARAQRSRQTALVSSRREPPPYGYRKGWIPRALEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAVQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNVDDPELQRPDEEAIREVLYALMCLVSSGRLYVLQWHEMYTVVFFLQITEKTRAA
LEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPP
RFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAA
DGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQK
ARERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISE
VIALGVPNPRPSNEIQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQPWRSGKDMAQNIYRP
SKNVDKDMYGDDLEARIKTNRFVPDKEFSNSDRNTRGRGRDGPVQFEEDPFGLDKFLEEA
KQHGGSKRPSDSSRPKEHEHESKKRRKD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaccagttttttgccagctccaacccagctgtcccaagatcagctagaacta
gaagaaagagcaagagctcagagatccaggcagactgctctggtctcatcacgaagggaa
ccacccccatatggttaccggaaaggatggataccacgggcactagaggattttggagat
gggggtgctttcccagaaattcatgtggcccaatatccattggatatgggccgaaagaag
aaaatgtcgaatgctttggctgttcaggtggatgcagaaggaaaaataaaatacgatgca
attgctcgacaaggacagtcaaaggacaaggttatttacagcaagtacacagatcttgtg
ccaaaagaggtcatgaatgtggatgatcctgaactgcaaagaccagatgaggaggcaatt
agagaggtactgtatgcactgatgtgcctcgttagcagtggtaggctttatgtcttgcaa
tggcatgagatgtatactgtggtattttttcttcagataacagagaagacaagagcagcc
ttggagaaatcagtctcccaaaaagttgcagcagccatgccagttcgagctgctgacaag
ctggctcctgcacagtacattcggtacacaccatcacagcaaggagttgcattcaactct
ggagcaaaacagagagtcattaggatggtggaaatgcagaaggaccctatggagcctcca
agattcaaaattaacaagaagattccacgaggaccaccatctcctccagcacctgtaatg
cactctccaagtagaaagatgactgtgaaagagcagcaagagtggaaaattcctccatgc
atttcaaactggaaaaatgcaaagggttacaccattccattagataagcgtctggctgca
gatggcagaggattgcagactgttcatattaatgaaaactttgccaaacttgctgaggca
ctctatattgctgacagaaaggctcgtgaggcagtagagatgcgtgcccaggtggagagg
aagatggctcagaaagaaaaggagaaacatgaagaaaagctcagagaaatggctcagaaa
gctagggagagaagagcagggatcaaaacccatgttgaaaaagaggatggggaagctaga
gaaagagatgaaatcagacatgaccggcgcaaagagagacagcacgacagaaatctttcc
cgggcagccccggataaaaggtcaaagctgcaaagaaatgagaacagagatatcagtgaa
gttattgccctgggggtacccaaccccaggccatccaatgaaatccaatatgaccagagg
ctgttcaaccagagcaagggtatggacagtggctttgctggaggagaggatgaaatttat
aatgtttatgaccagccttggaggagtggcaaggatatggcccaaaacatctacaggcca
agtaagaatgtggataaggacatgtatggtgatgatctagaagctcgaataaagaccaac
aggtttgttcctgataaagagttctctaactcggatcgtaacaccagaggcaggggcaga
gatggaccagttcagtttgaggaggatccatttggtttggacaagtttctggaagaagct
aagcaacacggtggttctaaacggccatcggacagcagccgccctaaggaacacgagcat
gagagcaaaaagaggaggaaggactga
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