KEGG   Hirundo rustica (Barn swallow): 120754789
Entry
120754789         CDS       T09369                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    120754789 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hrt03400]
    120754789 (WDR48)
DNA repair and recombination proteins [BR:hrt03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     120754789 (WDR48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR54 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 RAWUL WD40_like Nucleoporin_N Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 120754789
NCBI-ProteinID: XP_039924732
LinkDB
Position
1:151317902..151345488
AA seq 677 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPALWVATTKSSVNKWTLKGIHNFRASGDYDNDCTNPIPPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHIN
PMDEEENEINHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSNNEKAGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggcgcatcaccggcagaacacggcggggcggcggaaagtgcaggtttcctatgta
attagagatgaagtggagaagtacaaccggaacggggtgaatgcacttcagctggaccca
gcattaaacagactcttcacagcaggccgggactccatcataaggatatggagtgtcaat
cagcacaagcaagacccttacatagcatctatggaacatcacacagattgggtaaatgac
attgtgctctgctgcaatggcaaaacattgatatctgcttcttcagatactactgttaaa
gtgtggaatgcacataagggattttgcatgtcaacactaaggacgcataaggactatgtg
aaagctttagcatatgcaaaagataaggagctggtagcatctgctgggctggacagacaa
atattcctctgggatgtaaatactctcacagcactgactgcctcaaataatactgtcaca
acttcttccctgagtgggaacaaagactcaatctacagccttgcaatgaatcaaatggga
acagttattgtatcagggtccactgaaaaggttctaagggtgtgggatccaaggacttgt
gcaaaactaatgaaactcaaagggcacacagacaatgtcaaagctttgttgttgaacaga
gatggtacccagtgtctttcaggcagctctgatgggacaatccgcctgtggtcccttggg
cagcagaggtgcatagccacataccgagtccatgatgaaggtgtttgggctctgcaggtc
aatgaagccttcactcatgtttattcaggaggaagagacaggaagatttattgtacagat
ttacgaaatcctgatatccgggtgctgatctgtgaagaaaaggctccagttcttaagatg
gaactggatagatcagctgatcctcccccagcactttgggttgcaacaactaaatcctct
gtgaataaatggactttgaagggaatccataattttagagcatcaggagattatgataat
gattgtaccaatcccataccacccctgtgcacacagcctgaccaagttataaaagggggt
gctagtattattcagtgccacattcttaatgacaagaggcacatattaaccaaagacaca
aataataatgtggcatactgggatgtcttgaaggcatgtaaagttgaggaccttgggaaa
gtagattttgaagaagaaattaagaagagatttaaaatggtttatgtgccaaactggttc
tcagtggacttgaaaactgggatgttgacaattactttggatgagagtgactgctttgca
gcctgggtttcagcaaaggatgctggatttagcagtcctgatggctctgatccaaaatta
aatcttggagggcttctgctgcaagcacttctggagtattggcctagaacacatatcaat
ccaatggatgaagaagaaaatgagataaaccatgtgaatggggagcaggagaacagagtc
cagaaaggaaatggatacttccaagtgccaccacatacaccagttatttttggtgaggct
ggaggacgcactttgttcaggttgttatgtcgggattcaggtggtgaaactgaatctatg
cttcttaatgaaaccgtgccacaatgggtaattgacatcactgtggataaaaatatgccc
aagttcaataagattcccttctacctccaacctcattcatcatcaggggcaaaaactcta
aaaaaagaccggctgtcagccagtgacatgctccaggtgagaaaagtgatggaacacgtg
tatgagaaaatcataaacttggataacgagtctcagactacgagctcctccaacaatgag
aaagcaggagaacaagaaaaggaggaggacattgctgtgctagcagaggagaagattgaa
cttctgtgccaggaccaggttttggaccccaacatggaccttcgaactgtaaagcacttc
atctggaagagtggcggggacctgacgcttcactaccgccagaaatcaacgtga

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