Hirundo rustica (Barn swallow): 120754934 Help Entry 120754934         CDS       T09369                                  Symbol COL3A1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism hrt  Hirundo rustica (Barn swallow) Pathway hrt04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:hrt00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     120754934 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hrt00536]     120754934 (COL3A1) Glycosaminoglycan binding proteins [BR:hrt00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120754934 (COL3A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  120754934 NCBI-ProteinID:  XP_039925171 LinkDB All DBs Position 7:complement(30998469..31046978) Genome browser AA seq 1460 aa AA seqDB search MMSSVQKVTLLILAVFQPSVILAQQVVTGCTHLGQAYADRDVWKPEPCQICVCDSGSVLC DDIICDDQELDCPNPEIPFGECCPVCPQTTTPPPRTPGVVSRGPKGDPGSPGVPGRNGPP GPPGPPGSPGAPGAPGICQSCPSISGGSFSPQYDSYDVKAGGAGIGYPQPISGFPGPPGP SGPPGPPGHAGPPGSAGYQGSPGEPGQPGPPGPPGPVGMIGPVGPPGKDGEPGRPGRNGD RGIPGLPGHKGRPGMPGMPGMKGQRGFDGKDGAKGDSGAPGPKGETGLPGVNGAPGQPGP RGPAGERGRPGNPGGPGAHGKDGSPGAAGPPGPPGPPGTAGFPGSPGFKGEAGPPGPAGT SGSPGERGEPGPQGHAGPPGPQGPPGRAGSPGNKGEMGPSGIPGAPGLPGGRGLPGPPGA SGNPGAKGSPGDPGKDGAKGDPGPKGERGENGTPGAPGPPGEEGKRGANGEPGQNGVPGT PGERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGPAGERGQDGGPGLPGMRGLPGI PGSPGSDGKPGPPGSQGESGRSGPPGPPGPRGQPGVMGFPGPKGNEGAPGKNGERGPGGP PGSTGPPGKNGDVGLPGPPGPPGASGERGEPGAAGPPGLQGLPGGPGPAGENGKPGDPGP KGDIGGPGFPGPKGENGIPGERGAQGPPGPPGTRGGPGPAGTEGAKGPPGPPGPPGGTGL PGLQGMPGERGASGSPGPKGERGEPGGKGADGLPGARGERGNVGPIGPPGPAGPPGDKGE TGPAGAPGPMGARGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGARGEAGPPGA AGPQGGPGAPGPPGPQGIKGDRGSPGGPGAAGFPGARGLPGPPGNNGSPGPPGNAGPAGK DGPPGPPGSSGAPGGPGPAGIRGEPGAPGEKGPPGARGERGAPGEPGPQGIVGGRGNTGL PGLRGPSGPPGVAGAKGEDGKPGTNGVPGERGAPGPQGPIGQRGLPGEPGRDGNPGSDGL PGRDGSPGGKGDRGESGSPGPPGPPGHPGPAGNAGAPGKAGERGYQGPPGPPGSTGPAGA RGPAGPQGPRGDKGEPGERGSNGIKGHRGFPGTPGLPGPPGPLGPQGAIGGPGASGARGP PGPAGPPGKDGTSGYPGPIGPPGPRGTRGESGPAGPPGQPGLPGPSGPPGPCCGGGAAAL GVGEKGPVSYGYEYRDEPRENDINLGDIISSMKSINNQIENIISPDGSRKNPARNCRDLK FCHPELKSGEYWVDPNQGCKMDAIKVYCNMETGETCLNANPRTVPKKNWWTSANSEKKHI WFGESMSGGFQFSYGDPELPEDVSEVQLAFLRILSSRASQNITYHCKNSIAYMDHDSGNV KKALKLMSSTESEIKAEGNSKFTYAVLEDGCTKHTGEWGKTVFEYRTRKTVRLPVVDIAP LDIGGPDQEFGVDIGPVCFL NT seq 4383 nt NT seq  +upstreamnt  +downstreamnt atgatgagctctgtgcaaaaagtaactttgctcattcttgccgtgtttcaaccctcagtt attttggcacaacaagtcgtgacgggatgtacccatcttgggcaggcttatgctgacagg gatgtgtggaaaccagagccatgccaaatctgcgtgtgcgactcgggatctgttctctgc gatgacatcatctgtgatgatcaggagctggactgccccaaccccgagattccttttgga gagtgctgtccagtttgtccacaaacaacaacaccacctccaagaactcctggcgtagtc agccgaggccccaaaggagaccctggttctcctggagttccaggcaggaatggtccccct ggcccaccaggaccgccaggaagccctggagctcctggggcacctggaatctgccagtcg tgtcccagcatcagtggaggtagtttttctccacagtatgactcctatgatgtgaaggct ggtggcgctggtatcgggtacccacaacccattagtggcttcccaggaccccctggcccc agtggcccccctggcccacctggtcacgcaggtccccctggctctgccggataccagggt tcccctggagaaccaggacaacctggccctcctggacctccaggccctgttggaatgata ggcccagttggtccaccaggaaaagatggagaaccaggaagacccggcaggaatggagat cgtggaatccctggattaccgggtcacaagggacgccctggaatgcctgggatgcctggg atgaaaggccaacggggttttgatggaaaagatggtgccaaaggtgacagtggggctcct ggtccaaagggtgaaactggtcttcctggggtaaatggagcaccgggccaaccgggacca agaggtccagctggagaaagaggaagacctgggaatcctggtggccctggtgcccacggc aaagatggatctccaggagcagcgggcccacctggtcccccaggtccccctggaactgca ggatttccaggttctccaggttttaagggtgaagctggtcctcctggtcctgctggcact agtggtagtcctggagagagaggagaacctggtcctcagggtcatgctgggccacctggg cctcagggccctcctggaagagctggaagccctggcaacaagggtgaaatgggaccttct ggtattcccggtgctcctggtctgccaggaggtcgtggtcttccaggtcctccaggtgca agtggaaaccctggggcgaaaggcagtccgggagaccctggtaaagatggtgcaaaagga gatccaggcccaaaaggcgagcgtggtgaaaacggcaccccaggtgctcctgggcctcct ggtgaggaagggaaaagaggtgcaaacggtgaacccgggcagaatggagtacctggtacc cctggagaaaggggctcccctggcttccgtggcttacccggcagcaatggacttccaggt gaaaagggtcctgcaggtgagcgtggcagcccaggcccccctggccccagcggacctgca ggagaacgtggacaagacggaggcccaggtctccctggaatgagaggcttgcccggaatt ccaggaagccctggaagcgatgggaaacctggccctcccggcagtcagggtgaatctgga cgctctggcccacctggccctccaggcccacgtggccagccaggtgtgatgggtttccct ggtcctaagggcaatgagggggcaccaggcaagaatggagaaagaggccctggaggacca cctggatcaactggtcctcctgggaagaatggtgatgttggccttcctggccctccggga ccccctggtgcttctggggagagaggagaaccaggagcagcaggcccacctggcctccag gggttgcctggtggacctggaccagctggagagaatgggaagcctggagatccagggcca aaaggtgatattggaggacctggattcccaggccctaagggtgaaaatggtatcccagga gaacgtggtgctcaaggtcctccaggacctcctggaacaagaggtggaccaggccctgct ggcacagaaggtgccaagggtcctcctggcccacctggtccccctggaggcacaggactg cctggcttacagggaatgccaggagaaagaggagcttctggaagccctggaccaaaaggg gagaggggagaacctggtggtaaaggtgctgatggccttcctggtgcaagaggagagaga ggcaacgtaggtcccatcggtcctcctggtcctgccggcccacctggagataagggagag accggcccagcaggtgcccctggcccgatgggtgcccgtggaggtcctggtgaacgagga gaacaaggtcttcctgggcctgctggcttccctggagccccaggtcaaaatggggagcct ggtgggaaaggagaaagaggcccccctggtgcaagaggagaggccggaccccctggagca gcgggtccacagggcggccctggtgccccaggtccacctggtccccaaggaataaaagga gatcgcggatcccctggcgggcctggtgctgctggtttccctggtgctcgtggtctgcct ggtccccctgggaacaatggcagtccaggtccccctggtaacgcagggcctgcaggcaag gatgggcctcccggaccccccggtagctctggcgctcctggaggtccaggacctgctgga atcagaggtgagcccggcgcaccaggagaaaaagggccaccaggagcacgaggagaaagg ggggcaccaggtgagccgggtcctcaaggcatcgtcggcggccgggggaacacgggtctg ccgggcttgcgcggccccagcggcccacccggcgtggcaggggccaagggtgaagatggc aaaccaggcaccaatggtgtcccaggagaacgcggtgctcctggtccccaaggccctatt ggacagagaggcttacctggagagcctggcagagatggtaaccctggctccgacggcttg cctggacgtgacggatccccaggaggcaaaggtgaccgtggtgaaagtggttctcctggc cctccaggaccccctggccaccctggacctgcaggtaatgctggtgcacctggaaaagct ggtgaaagaggatatcagggtccacctggccctcctggctctacgggtcctgctggtgct cgtggtcctgctggtcctcaaggtcctcgtggtgataaaggtgaacctggtgaacgaggc agcaatggcataaagggtcacagagggtttcctggtacccccggtcttcctggtcctcct ggtcctctgggtccacaaggtgcaattggaggtccaggagcttcaggtgcaaggggtccc ccaggaccagctgggccacctggaaaagatggcaccagtggctacccaggtccaattggt cctcccggcccccgcggtaccagaggcgaaagtggccctgccggtccaccagggcagcct ggtcttcctggtccttctggccctcctggtccatgctgtggtggtggtgcagctgccctg ggtgttggtgagaaaggtccagtttcctacgggtatgaatatcgagatgagcccagggaa aacgatatcaatctgggtgacatcatatcttcaatgaaatcaattaacaaccagattgaa aacatcattagtcctgatgggtcccggaagaacccagctcgtaactgccgagacctgaaa ttctgccatcccgagctcaagagtggagagtattgggttgatcctaaccaaggctgcaag atggatgctattaaagtctactgcaatatggaaaccggtgagacctgcctcaatgctaac cccaggactgtgccaaagaaaaactggtggaccagtgcaaacagtgaaaagaaacacatc tggtttggagagtccatgagtggaggcttccagttcagctatggagatcctgagcttcca gaggatgtctccgaagttcagctggccttcctgcgcatcctctccagccgtgcctcccag aacatcacctatcactgcaagaacagcattgcctacatggaccacgacagtgggaatgtt aaaaaagctctgaaactgatgagctctacagaaagtgagatcaaggctgaaggaaacagc aaattcacatatgctgttctggaagatggctgcactaaacacactggtgagtggggtaaa acagttttcgaatacaggacgcgcaagacagtgaggttgccggtggttgatattgcacca ttagatattggtggtcctgatcaagaatttggcgtggacattggcccagtctgcttctta taa

DBGET integrated database retrieval system