Hirundo rustica (Barn swallow): 120755175
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Entry
120755175 CDS
T09369
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120755175 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hrt01007
]
120755175 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrt03016
]
120755175 (GARS1)
03029 Mitochondrial biogenesis [BR:
hrt03029
]
120755175 (GARS1)
Enzymes [BR:
hrt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
120755175 (GARS1)
Amino acid related enzymes [BR:
hrt01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120755175 (GARS1)
Transfer RNA biogenesis [BR:
hrt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120755175 (GARS1)
Mitochondrial biogenesis [BR:
hrt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120755175 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
120755175
NCBI-ProteinID:
XP_058277504
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All DBs
Position
1:152369757..152393140
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AA seq
711 aa
AA seq
DB search
MPLPRSVLPALLRRLARPLRSAAPPAMDGPQAEALLAPLRNAVRQQGELVRKLKEEKAPQ
VDIDRAVAELKARKRVLEAKELALQPKDDIVDRVKMEDTLKRRFFYDQAFSIYGGVSGLY
DFGPVGCALKNNIIQAWRHHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKN
GECFRADHLLKAHLQKLMSDKKCTAEKKAEMENVLTQLDNYGQQELADLFVNYNVKSPVT
GNDLSPPVSFNLMFKTSIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGN
SFRNEISPRSGLIRVREFTMAEIEHFVDPSEKNHPKFQNVADLNILLYSAKAQVSGQSAH
VMRLGDAVQQGVINNSVLGYFIGRIYLFLTKVGVSPEKLRFRQHMENEMAHYACDCWDAE
SKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKHLKEPISVNIVQFEANKGAIGKAY
KKDAKVVMEYLSVCDECYISEMEQLLNEKGEFTVETEGKTFLLTKDMVTVKRFQKTLHVE
EIIPNVIEPSFGIGRIMYTVFEHTFRIREGDEQRTYFSFPAVVAPFKCSVLPLSQNQEFM
PFVKELSEALTRNGISHKVDDAAGSIGRRYARTDEIGVAFGITIDFDTVNRTPHTATLRD
RDSMRQIRAEISELPAIIRDLANGYLTWADVEAKFPQFEGQETGKKDTIEE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttccccgtagcgtcctgcccgccctgctgcgccgcctcgcccgcccgctccgc
tccgccgccccccccgccatggacggccctcaggccgaggcgctgctggcgccgctccgg
aacgcggtgcggcagcagggagagctggtgaggaagctgaaggaagagaaagctccccag
gtggacatagacagagctgtagcagagctcaaagctcggaagagggtcctagaagcgaag
gagctggccttacagcccaaagatgacatcgtggacagagttaagatggaagacactctc
aaaaggaggtttttctatgaccaagccttctctatttatggaggagtcagtggtctgtat
gactttgggcctgttgggtgtgctttgaagaacaacatcatccaagcatggagacatcac
tttattcaggaagagcaaatcctggagattgactgcaccatgctcacgcctgagccagtt
ctaaagacttctggccatgtagacaagtttgccgacttcatggtgaaagatgtgaaaaat
ggggaatgttttcgtgccgatcatctcttaaaagctcacctgcagaaactgatgtctgac
aagaagtgcacggcggagaaaaaggcagaaatggaaaatgttctgacgcagttggacaac
tatggccagcaagagcttgcagatctctttgtgaactacaatgtgaagtcccctgtcact
gggaatgacctgtcccctcctgtttctttcaatctgatgttcaaaacctccattgggcct
ggaggaaacatgcctggctacctgaggccagaaactgcacagggaatattcctcaacttc
aaacgtctgctggagtttaaccaaggcaaattgccttttgctgctgcccagattggaaat
tccttcaggaatgaaatctcaccccgctccggccttatcagagtgagggaattcaccatg
gcagaaattgagcactttgtggaccccagtgagaaaaaccaccccaagtttcagaatgtg
gcagatctcaacatcctcttgtactcggccaaggcgcaggtcagcgggcagtctgcgcac
gtcatgaggctgggagacgctgtccagcagggtgtgatcaataactcggttctcggttac
ttcatcggcagaatctacctcttcctcacaaaggtcggcgtatccccggagaagctgcgc
ttccgacagcacatggagaatgagatggctcattatgcctgtgactgctgggatgcagag
tccaaaacctcctatggttggattgagatcgttggctgtgctgatcgttcctgctatgac
ctttcctgccatgcccgcgccaccaaagttcctctcgtagctgagaagcatctcaaagaa
cctatatcagtcaacattgttcagttcgaggcaaataagggagccattggcaaagcttac
aagaaggatgccaaggtggtgatggaatacctttccgtgtgtgacgagtgctacatcagc
gagatggagcagctgctcaacgagaaaggggaattcactgttgaaactgaagggaaaact
tttctattaacaaaggacatggttactgtgaagagatttcagaaaacattacatgtggaa
gaaatcatcccgaatgtcattgagccctcgtttggcattggaaggatcatgtacacggtg
tttgagcacacattccgcatccgggaaggagacgagcagagaacgtatttcagcttccca
gctgttgtagcaccgttcaagtgctccgttcttcctctgagccagaatcaggaattcatg
ccttttgtcaaggaattatccgaagcactgaccaggaacgggatctcgcacaaggtggac
gacgccgcgggctccatcggccggcgctacgcccgcacggacgagatcggcgtggccttc
ggcatcaccatcgacttcgacacggtgaaccgcacgccgcacacggccacgctgcgcgac
cgcgactccatgcgccagatccgcgccgagatctctgaacttcctgccatcatccgagac
ctggccaacggttatctcacctgggctgatgttgaggcaaagtttccacaatttgaggga
caagagactggcaaaaaggacacaatagaagaataa
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