Hirundo rustica (Barn swallow): 120755230
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Entry
120755230 CDS
T09369
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120755230 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120755230 (PRPF40A)
Spliceosome [BR:
hrt03041
]
Complex A
U1 snRNP components
U1 related factors
120755230 (PRPF40A)
Complex B
120755230 (PRPF40A)
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Paralog
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GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
120755230
NCBI-ProteinID:
XP_039925912
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All DBs
Position
7:1155431..1174513
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AA seq
900 aa
AA seq
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MRPGGVDRGSLMMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMP
GMMQSVMPGMMMSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVSAVQQSSTSTS
SASEDHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSD
SGKPYYYNSQTKESRWAKPKELEDLEAMIKAEENSSKPEDAAAAASAPAAAADAAGGAGA
APASEGAAGGAAGAAPEGEPAPAAAAGDADTAGAAAAEEQGPAGAGPGAQDGGAEAAAAA
ATEEGAKQEAQGDAAAKKEDEEAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQA
MKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMT
STTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNIL
DNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQK
SLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPAISSDIRFTSMLGQPGSTAL
DLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIK
LAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEP
AFEDITLESERKRIFKDFLHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDD
SHSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDVEREKDKKE
RERDSEKERARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccggcggcgtcgaccgcggctctctcatgatgggacacccgggaatgccccac
tacccccccatggggatgcaccccatggggcagagacctcccaacatgcccccggttccc
cacgggatgatgcctcagatgatgccccccatgggaggacccccgatggggcagatgcct
ggaatgatgcagtcggtgatgccggggatgatgatgtcccacatgtcccaggctgccatg
cagcccacggttcctccaggggtgaacagcatggatgcacaagtaggtgtgacccctcct
ggaactcagacgacgcaccccgtggtctccgcggtgcagcaaagctccaccagcaccagc
tctgccagcgaggaccactccaagcagaaatccacgtggacggagcacaaatccccggat
gggagaacttactactacaacaccgagaccaagcagtccacgtgggagaagccagatgac
ctcaaaacccccgctgagcaattgttatccaagtgtccctggaaggaatataaatcagat
tctgggaagccttattattacaattcccaaacaaaggaatcccgctgggcaaaacccaaa
gagctggaggacctggaagcaatgattaaagctgaagaaaacagctccaagccggaggac
gccgccgccgccgcctcggctccggcggccgccgccgatgccgccggcggagcgggcgcg
gccccggcctccgagggcgccgcgggaggagccgccggagccgctcccgagggcgagccc
gccccggccgccgccgcgggggacgcggataccgctggagcggccgccgccgaggagcag
ggcccggccggggccggccccggagcgcaggacggcggcgccgaggccgcggcagcggcc
gccacggaggagggggccaagcaggaggcacagggagacgccgctgcaaagaaggaggac
gaggaagcgcagccagttaagaaaacctacacctggaacacaaaggaagaggccaaacaa
gcatttaaagagctgttaaaagaaaagcgggttccatccaatgcttcctgggagcaggcc
atgaaaatgatcattaacgaccccagatacagtgctttggccaaactgagtgagaagaag
caggcctttaacgcttacaaagttcagacggagaaggaggagaaggaggaagccagatcc
aagtacaaggaagccaaggaatccttccaacgtttcctggaaaaccacgagaagatgacc
tccaccaccagatacaagaaagctgaacaaatgtttggggagatggaagtgtggaatgcc
atatccgagcgggaccggctggagatctacgaggatgttttgtttttcctgtccaagaag
gagaaggaacaagccaagcaactgcggaagaggaactgggaggctctgaagaacatcctg
gataacatggccaacgtcacctactgcaccacctggtcagaggcccagcagtacctcatg
gacaaccccaccttcgccgaggatgaggagctccagaacatggataaggaggatgccctg
atctgttttgaggagcacatcagggccttggaaaaagaggaggaggaagagaagcagaaa
agtttgctgagggaaaggaggaggcagcgtaaaaacagggaatctttccagctgtttctg
gatgagctgcacgagcacgggcagttacattccatgtcctcctggatggagttgtacccg
gccatcagctccgacatcagattcaccagcatgctgggccagccgggatcgacagcgctg
gacctgttcaagttttacgtggaggatctcaaagctcgttaccacgacgagaagaagata
attaaagacatcctaaaggataaaggatttgtggtggaagtgaacacttcctttgaggat
ttcgtcactgtcatcagctccacgaaaagggccaccacgctggatgcagggaatatcaag
ctggctttcaacagtctgctggagaaggcggaagcgcgggagcgggagcgggagaaggag
gaagcgcggaagatgaagaggaaggaatcggccttcaagagcatgttgaaacaagccacc
cctcccatcgagctggacgctgtctgggaggatatcagagacagatttgtgaaggaacca
gcatttgaagacatcaccctggaatctgaaaggaaaaggatatttaaggatttccttcac
gtgcttgagcacgagtgtcagcaccaccactccaagaccaagaaacattcgaagaaatcc
aaaaaacatcaccggaagcgctcccgttcccgctccggctcggagtccgaggatgacgac
agccactccaagaagaagcggcagcgctcggaatcgcgctcggtgtcggagcgttcttcc
agcgccgaatccgagaggagttacaagaagtccaaaaaacacaagaagaagagcaagaag
aggaggcacaagtctgattcaccagaatccgatgtggaacgagagaaggacaagaaagag
agagagagggacagtgagaaggaaagagccagacagagatccgagtccaagcataaatct
cccactaagaaacggcctgggaaagattccggaaactgggacacctccggcagcgagctc
agcgagggcgagctggagaagcagaggaggactctgttggagcagctggacgaagatcag
tga
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