Hirundo rustica (Barn swallow): 120755267
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Entry
120755267 CDS
T09369
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrt01002
]
120755267
Peptidases and inhibitors [BR:
hrt01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
120755267
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
120755267
NCBI-ProteinID:
XP_039925966
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All DBs
Position
7:19301093..19331036
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AA seq
1196 aa
AA seq
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MMFLRFWWLLWILEHHEFLAENLREEKIYGLRRSKPKHLLSNIVEKYPSPNDQDQDCILE
IAFLLDSSESAKDYNHEQQKKFVLQTVDRMKSLQLSSGRTLRWRMALLQYSSTVSIEQTF
HDWKGPEAFKSHIAPITHIGHGTYTTYAITNLTQLYMTEGTLGSLKVAMLFTDGVDHPRN
PDIFAATADAKHQGIVFFTMGMTRVAEEVNNAAKLRLLASVPASRFVFNLQEKDTVEKVL
KEMKDLSEEECPQVDTCNCEKGERGLPGPAGKKGRTGDDGAPGLKGAKGDPGLNGIPGRD
GIEGKSGHKGEKGERGECGIPGIKGDRGPEGPVGPRGIRGMQGLQGQSGDQGPEGLQGSK
GERGHPGPPGLPGETGIGLPGPKGDTGLTGRPGPVGPPGIGEPGFMGPQGPQGIQGERGS
PGEGLPGAKGDRGFDGPKGPRGLPGISIKGEKGECGPPGLPGSVGLPGIGIQGEKGVEGP
KGPPGSRGLPGQGIPGPKGEQGLPGETGAPGERGIGEPGSKGDPGPSGLAGLPGLPGEDG
APGQKGEPGMPGLRGPEGAPGIGIQGEKGDQGQRGIRGLTGPTGVPGPVGAKGEPGAPGR
LGLPGPPGRSVPGPKGDIGLPGLPGPIGEPGFGLPGAKGDQGLPGPPGPFGQKGDGYPGP
PGLPGLPGIPGEQGPDGVGLPGPKGDPGSRGPVGPPGPPGKGLPGPKGTTGRPGPPGSLG
PPGEGIQGTKGEQGIQGMPGPRGPPGDGLLGEKGDRGATGDKGKKGEKGDVGDPGLPGEP
GKTGPKGDQGLTREDIIILIKEICGCSIKCKEIPMELVFVIDSSESVGPENFEIIKDFVT
ALVDRVTVGRNATRIGLVLYSLEVRLEFGLNKYPTRQDVKRAIRKMQYMGEGTYTGTAIR
KATQEGFFGARAGVRKVAIVLTDGQTDKREAVKLDLVVREAHAASIEMYAIGIVNTSDPT
QVEFVRELNLIASDPDEEHMYLIDDFNTLSALESKLVNQFCEDEHGTLVYNHNENGASIT
GRSFHSVSPSSLHYILQKNNVNRQPLSAQTRGVSTVESPLSLGHLPLPLAPTNIPPVINE
AYEEEQDEEKLPTLLKVNTRAVLPLLSSKQPPSNKVMASSLPTAGPTPGPESTVELRCQL
RLDQGPCRVYTIRWYYDKQANACAQFWYGGCNGNANRFESEQECRQACVFFSGGRN
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcctcagattctggtggcttttgtggatacttgaacatcatgaatttttagca
gaaaatctcagggaagagaagatatatggattgagaagatcaaaacctaaacaccttctg
tcaaatattgtagaaaaatatcccagcccaaatgatcaagatcaagattgcattctggaa
atcgcttttttactggacagctccgaaagtgctaaggactataatcatgaacaacagaaa
aaatttgtactgcaaacagtagacagaatgaaaagtctgcagcttagttctggacgtacc
cttcgctggaggatggccttacttcagtacagcagcactgtttccatcgagcaaactttc
catgactggaaaggtcctgaggcattcaaatcccacattgctcccatcacccacataggt
catggcacctacacgacttatgctataactaatcttacccaactctacatgactgaaggg
actctgggtagcctgaaagtagccatgcttttcactgatggagtggatcatccaagaaac
ccagatatttttgcagctacagctgatgctaaacaccaaggaattgtatttttcacaatg
ggaatgaccagagtggctgaggaggttaacaatgctgccaagctccggctcctggccagt
gtcccagcatccaggtttgttttcaacctccaggagaaagacacagtggagaaggtcctc
aaagaaatgaaagacctgtctgaggaagagtgtccccaggttgacacatgtaactgtgag
aagggggaaagaggccttcccggtcctgctggtaagaaggggcgcactggtgatgatgga
gctccaggcctgaaaggagcaaagggggacccaggtcttaacggaatcccaggacgagat
ggaatagaggggaaatctggacataaaggagagaagggtgaaagaggtgaatgtggaatc
ccaggaataaaaggagacagaggccctgaaggtccagtaggccccagaggaataagaggg
atgcagggtctgcaaggacaatctggagatcaagggcctgaaggcctgcaaggatcaaag
ggtgaaagaggtcaccctgggccacctggcttgcctggagagactggaataggactgccg
ggcccaaagggtgacactggtttgacaggaagaccgggccctgttggcccacctggaatt
ggtgagccaggatttatggggcctcaaggaccacaaggtattcaaggagaaagaggttca
ccaggagaagggcttccaggagcaaagggagaccgtggctttgatggaccgaaaggccct
cgtggacttccaggcatcagcataaaaggtgaaaagggtgagtgtggtcctcctggttta
ccgggatcagttggattacctggaattggaattcaaggagaaaagggagtggagggccca
aaaggaccacctggctctagaggactaccaggacaggggatacctggaccaaagggtgaa
caaggcttgccaggagagactggagcaccaggagaaagaggtattggagaacctggttct
aagggtgatccagggccgtcaggtctggcaggtctgcctggtcttccaggagaagatgga
gcccctggacaaaagggtgaaccagggatgcctggtcttagaggtcctgaaggtgctcca
gggattggaatacagggggaaaagggagatcaaggacagagaggaatacgtggactaaca
ggaccaacaggagtgcctggacctgttggagctaaaggggagcctggtgcacccggacgt
cttggactgccaggccctcctggaagatctgtgccgggaccaaagggtgacattgggtta
cctggtcttcctggaccaattggagaaccaggttttgggcttcctggggcaaagggtgac
caaggccttccaggaccccctgggccatttgggcaaaaaggagatggttatcctggccca
cctggcttgccaggcctccctgggattcctggtgaacaaggcccagatggagttggacta
ccaggacctaagggtgatcctggtagtagaggaccagttggcccccccggtcccccagga
aaaggcctgccaggaccaaaaggaaccacaggacgcccagggccacctggctctctggga
cctcctggtgaaggaattcaaggaactaagggggaacaaggtattcaaggaatgccagga
ccacgaggcccccctggagatgggcttctgggagagaagggagatcgaggagctacaggc
gacaaggggaaaaaaggagaaaaaggtgatgtgggtgaccctggtttacctggagaaccc
ggcaaaaccggaccaaagggagaccaaggcctaacaagagaagatataattatattaatt
aaagagatatgtggttgcagtattaaatgtaaggaaattcctatggagcttgtatttgtg
attgacagctctgagagtgtgggaccagaaaactttgagattatcaaagactttgtcact
gctttagtagacagagtaactgtaggcagaaatgctaccagaattggccttgtgttatac
agtttagaagttcggctagaattcgggctcaacaagtatccaacccgacaggatgttaag
cgagcaattagaaaaatgcaatacatgggagaaggcacttacacaggaactgctatccgc
aaagcaacccaggaaggattttttggtgctcgagcaggggtgagaaaagtagctattgtg
ctaacagacggccaaacagacaagagagaagctgtaaaactagatcttgttgttcgagaa
gctcacgcagcaagcatcgaaatgtatgcgataggaatcgtaaatacttcagatccaaca
caggttgagtttgtgcgtgagctaaatctgattgcttcagacccagacgaagaacacatg
tatctcattgatgactttaacaccctctcagctctggagtccaaattagtcaatcaattt
tgtgaagatgaacacggcaccttagtatacaaccataatgagaatggtgcaagtataact
gggcgatccttccattcagtatctccaagttctttacattacatacttcagaagaacaat
gttaatagacaaccactttcagcacagacacgtggagtatctacagtagaaagtcctctg
agtcttggccatcttcctctaccattagctccgaccaacatacctcctgtcatcaatgaa
gcctatgaagaagaacaagatgaagaaaagctgccaacccttctaaaagtaaacactaga
gctgtgttaccattattgtcatctaaacaaccaccatccaataaagtgatggcatcgtct
cttccaactgcaggccccacaccaggacctgaaagtactgtggagctccggtgccagcta
aggctagatcaagggccatgccgtgtttatacaatcaggtggtattatgacaaacaagcc
aatgcctgcgctcagttttggtatggtggctgcaatggaaatgcaaaccgctttgagtcc
gaacaggaatgtagacaggcttgtgtatttttttctggaggtaggaattag
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