Hirundo rustica (Barn swallow): 120755377
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Entry
120755377 CDS
T09369
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120755377 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120755377 (CNOT10)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120755377 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ARM_TT21_N
TPR_8
ARM_TT21
TPR_17
TPR_7
TPR_MalT
EMP24_GP25L
BLOC1_2
DUF6058
DUF948
Motif
Other DBs
NCBI-GeneID:
120755377
NCBI-ProteinID:
XP_039926146
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All DBs
Position
1:complement(114269583..114301862)
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AA seq
744 aa
AA seq
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MAADKAADQGTEKHEGAGTSGITDQEKELSSSALQAFQAGNYDACLQHLNTLQDINKDDY
KITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSVVEEMDGLDDVENSMLYYNQAVILY
HLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMISQ
GNNNSKNGKNESGNNTNKDSSNQKTESGALIEVAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEPK
QENGSKTSNQLGGNTENTESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYD
KARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDMRK
KPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaaggctgcggatcaaggtactgaaaaacatgaaggagcaggtacttct
gggattactgatcaggaaaaggaattgtcaagcagtgcattacaagcttttcaggctgga
aactatgatgcttgtttgcaacacctaaatacccttcaagacataaacaaagatgactac
aaaataactttgaatactgctgttgcagagttctgtaaaagtaatcagactaccacagac
aatttgagacaaacccttaaccagctgaaaaaccaggtacactctgttgttgaagaaatg
gatggtttggatgatgttgagaacagtatgctgtactacaatcaagctgtaatcctgtac
catctgcgtcagtatactgaagctatatctgttggggagaagctgtaccagttcatagag
ccttttgaagagaagtttgcacaggctgtgtgcttcttgcttgtagacttatacctgtta
acttaccaagctgagaaagccttgcatctgctagctgttctggaaaaaatgatttcacag
ggcaacaataacagtaagaatggaaaaaatgagtcaggtaataatactaataaagattcc
tcgaatcaaaaaactgaaagtggagctttaatagaagttgctaaatctaagatacatcag
tataaggtgagagcctatatccagatgaagtcattaaaagcatgcaaaagagagatcaag
tctgttatgaatacagctgggaattcagctccttctctctttcttaagagtaattttgag
tatttgagaggcaattaccgtaaagctgtcaaacttttgaacagtgccaacattgctgaa
catccgggcttcatgaaaacaggtgaatgcttaaggtgtatgttctggaacaatcttggc
tgcatccactttgcaatgggaaagcacaatttaggaattttttactttaaaaaagccttg
caagaaaatgataatgcatgtgcacagctgggaacgggcagctcggatccaggtaaaaaa
ttttcagggagacccatgtgtacactactgactaacaaacgatatgagttgctctataac
tgtggaattcagctcttgcatattggcaggcccttagctgcctttgaatgcctgattgag
gcagtccaggtttatcactcaaaccctcgtctgtggctgagaatagcagaatgctgcatt
gctgccaataaagggacatcagaacaagagactaaaggtcttcccagcaaaaagggaatt
gtgcaatcaatagtaggtcaaggctaccaccgtaagatagtcctagcatcccagtccata
cagaatgttgtctataatgacgggcaatcctcagcaatacctgtagccagcatggagttt
gcagcgatttgtctaagaaatgccttgctgctactgccagaagatcaacaggagcccaag
caggaaaatggatctaaaactagtaatcagctggggggaaatacagaaaacactgaaagc
agtgaagcatgcagcaataaaagtcatgaaggggataaattcattgcagctcctccttct
tcgcctttgaagaaacaggaattggagaatttaaggtgctcgatccttgcatgtagtgct
tacgtggctctggctttgggggataaccttatggcactgaatcatgcagataaacttctg
caacaaccaaagctctcagggtctctgaagtttcttggacatttgtatgcagcagaagct
ctcatctctctagacagaatatctgatgccatcactcacttgaaccccgagaatgtcact
gatgtttcccttgggatctcttcaaatgagcaggatcaagggtctgacaaaggagagaat
gaagcaatggaatcttctggcaagcagacaccacagtgttaccccagttcagtcacgtct
gcacgaactatgatgttatttaaccttggaagtgcttactgcttgaggagtgaatatgac
aaagctcgaaagtgtcttcatcaggccgcttcactgatccaccccaaagagatccctcca
gaggccatcctgctggcagtgtaccttgaattgcagaatggtaacacgcagctggcgctg
cagatcatcaagaggaaccagctgctcccttctgtgaaaacactctctgacatgcggaaa
aagcctgttttccagccagtccactcaatccagcccattcagatgccagctttcaccact
gttcaaaggaagtga
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