Hirundo rustica (Barn swallow): 120755397
Help
Entry
120755397 CDS
T09369
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120755397 (DDX18)
03009 Ribosome biogenesis [BR:
hrt03009
]
120755397 (DDX18)
Enzymes [BR:
hrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120755397 (DDX18)
Spliceosome [BR:
hrt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120755397 (DDX18)
Ribosome biogenesis [BR:
hrt03009
]
Eukaryotic type
90S particles
Helicases
120755397 (DDX18)
Pre-60S particles
120755397 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
120755397
NCBI-ProteinID:
XP_039926165
LinkDB
All DBs
Position
7:8280335..8290564
Genome browser
AA seq
647 aa
AA seq
DB search
MSVPAAASNLPMRLLRRKIHKRNLKLRQRNLKLRAAQGAVPSPSEAASQGPPEEEEVEEA
AVPEVDTAAEEGAEPADAAGPHSGEKKKKKKKKRKAVANGGHDTETKKAKTEEDESAEVE
DGDKQDSGEKEMEEEEEDEVPSLPLGLTGAFEDNSFASLAGSVSENTLKGINDMGFTHMT
EIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMPRNGTGVIILSPTREL
AMQTYGVLKELMNHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFM
YKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKEP
LYVGVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYE
LLNYIDLPVLAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPP
DDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQS
QLEKLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYDVNNLDLPKVSLSFGFKVPPFVDL
NVNSNHGRRLQKRGGGGGFGYQKSKNVHKAKIFKHISKKSDNRQFSR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgccggctgctgccagcaacctgcccatgcggctgctccgcaggaagatccac
aagcgcaacctgaagctgcggcagcgcaacctgaagctgcgggcggcccagggggcagtg
ccttcgccgagcgaggcggcttctcagggacccccggaggaggaggaggtggaggaggcg
gcggtgccggaggtggatacagcggccgaggagggcgcggagcctgcggacgcagccgga
ccccacagcggggaaaagaagaaaaagaagaagaagaagagaaaagcggtggccaatgga
ggacatgatacagaaaccaaaaaagcaaaaactgaagaagatgaatctgcagaggtagaa
gatggagataagcaggactctggagagaaggaaatggaggaggaggaggaggatgaagtg
cccagtttgccactaggtctaacaggtgcttttgaagacaattcctttgcttccctggct
ggttctgtcagtgagaatacactgaaaggcataaacgacatgggctttacacacatgaca
gaaattcaacataaaagtattaagcctcttctggaaggcagggatattttagcagctgca
aaaacaggcagtggaaaaacacttgcgtttctcattcctgcagtagagcttatctacaag
ctgaaattcatgcctaggaatggaacgggcgttattattctctctcctactcgagagctg
gccatgcaaacctacggagttcttaaagaacttatgaatcatcatgtgcacacctatggt
ctgatcatggggggcagtaacagatcagcagaagcacagaaacttggaaatggaatcaac
atcattgtagcaacgccaggaagactgctggatcacatgcagaacactccaggtttcatg
tacaagaacttgcagtgtttggtaattgatgaggcagatcgaatcttggaggttggattt
gaagaagaaatgaaacagatcataaaacttttaccaaagcgccgacagacgatgcttttc
tctgccacacaaaccagaaaggtcgaagatctggcaaagatctctctgaagaaagagcca
ctgtatgttggggttgatgataacaaggagacagcaacagtagatggtctggaacagggt
tatgtggtgtgtccatctgaaaaaagatttcttttgctcttcacgttcctcaagaagaac
cggaagaagaaactgatggtatttttttcttcatgtatgtcagtgaagtaccactatgaa
ttactcaactacattgatctgcctgttttggccattcatggcaaacagaaacagaccaaa
cgtaccacaacatttttccagttctgtaatgcagagtctggaatactgttgtgcactgat
gtggctgccagaggattggacattcctgaggttgactggattgtccagtatgaccctcca
gatgatccaaaggaatatatccatcgtgttggtaggactgccagaggaataaatggtaga
ggacatgctctgctcattttacgaccagaagaactgggcttccttcgttatctgaaacaa
gccagggtacctctaagtgaatttgaattttcttggtcaaaaatctctgacatccagtct
cagctggaaaaactgatagagaagaactacttccttcacaagtcagcccaggaggcttac
aaagcttacatcagagcttacgactcccattctctgaagcagatctatgatgtcaataat
ctggatcttcccaaagtcagcctttcatttggttttaaagttcctccatttgttgacctc
aatgtgaacagcaaccatggcagaagactacagaaaagaggtggaggtgggggatttggc
taccagaaatcaaagaacgtccacaaggcaaaaatcttcaagcacatcagcaagaaatct
gacaatcggcagttttctcgttaa
DBGET
integrated database retrieval system
