Hirundo rustica (Barn swallow): 120755582
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Entry
120755582 CDS
T09369
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04510
Focal adhesion
hrt04517
IgSF CAM signaling
hrt04518
Integrin signaling
hrt04519
Cadherin signaling
hrt04520
Adherens junction
hrt04810
Regulation of actin cytoskeleton
hrt04820
Cytoskeleton in muscle cells
hrt05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120755582 (VCL)
04518 Integrin signaling
120755582 (VCL)
04519 Cadherin signaling
120755582 (VCL)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120755582 (VCL)
04520 Adherens junction
120755582 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120755582 (VCL)
04810 Regulation of actin cytoskeleton
120755582 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120755582 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hrt04812
]
120755582 (VCL)
04147 Exosome [BR:
hrt04147
]
120755582 (VCL)
Cytoskeleton proteins [BR:
hrt04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120755582 (VCL)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120755582 (VCL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Spectrin_SYNE1_2
Motif
Other DBs
NCBI-GeneID:
120755582
NCBI-ProteinID:
XP_039926635
LinkDB
All DBs
Position
8:complement(15119941..15177270)
Genome browser
AA seq
1067 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAI
RQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQG
LDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMAEARKVA
ELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNR
AVANTRPVKAAVHLEGKIEQAQRWIDNPTVADRGVGQAAIRGLVAEGRRLANVMMGPYRQ
DLLAKCDRVEQLSAQLAELAARGEGESPQARAVAAQLQDSLKDLKTRMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAAKLGATAEKAAAVGTANKTTVE
GIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKGFLDSGYKILGAVAKVREAFQPQE
PDFPPPPPDLEHLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMM
MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASD
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccacacgcgcaccatcgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggaaaggccatcccggacctc
accgcccccgtgtcggccgtgcaggccgctgtcagcaacctggtgcgggttggaaaagag
actgtgcagacaacagaagaccagatcttgaaaagggatatgccaccagcatttatcaaa
gtggagaacgcctgcaccaaacttgttcgggcagcccagatgctgcaagcagatccttac
tcagttccagctcgtgactatctcattgatggatcaaggggaatcctttctggaacatct
gacttgctcctgacgttcgatgaagcagaggtccgtaaaatcatccgtgtctgcaaagga
atattggaatatctgactgtggcggaagtggtagagacaatggaggatctggtgacttac
acaaagaatttagggccaggaatgacaaagatggccaaaatgattgacgagagacaacag
gaattaactcatcaggaacacagggttatgctggtgaactccatgaatacagtgaaggag
ctattgccagtacttatttcagctatgaagatttttgtaaccacaaaaaattctaaaagc
cagggaatagaagaggccttgaaaaatcgcaatttcacagtagagaaaatgagtgctgag
ataaatgaaataattcgtgtattgcaactcacttcctgggatgaagatgcctgggcgagc
aagaaggacactgaagccatgaagagagctttagccttaatagattcaaagatgaatcag
gcaaaaggttggctgagagatccaaatgcacctccaggggatgctggtgagcaggccata
aggcagatccttgatgaagctggcaaagcaggagagctgtgtgcaggcaaagagcgcaga
gagatcctgggcacgtgcaaaaccctggggcagatgactgaccagctggctgacctccgg
gccagaggacagggtgctacacccatggctatgcagaaagcccagcaggtgtcccagggt
ctggacttgctcactgccaaagtggagaacgcagcccgcaagctggaggccatgaccaac
tctaagcaggcaattgcaaagaagattgatgctgctcagaattggcttgctgatcctaat
gggggcagtgaaggagaagaacatattcggggaattatggctgaagcaaggaaagttgca
gaactatgtgaggagcctaaagaaagagatgatatccttcgttccttgggggaaatctct
gctttgacggccaagctgtcagacctgcgacgacatgggaaaggtgactctcctgaggcc
cgtgctttggctaagcaaatagctacatcacttcagaatttacagtccaaaacaaacagg
gctgtagcaaatacaaggccagttaaagcagctgtccatttggagggcaagattgaacaa
gctcaaaggtggatagacaatcctacagttgctgatcggggagtaggccaggccgccatc
cgcgggctggttgccgaaggccggcgtttggccaacgtcatgatgggcccgtaccggcag
gacctgctggccaagtgcgaccgcgtggagcagctctctgcccagctggctgagctggcc
gcgcgaggggagggcgagtccccccaggccagggccgtcgctgcccagctccaggactcg
ctgaaggatcttaaaacacgaatgcaagaagcaatgacccaggaagtttctgatgttttt
agtgacaccacaactcctattaaattgttagcagtagcagccactgctccctctgatgct
cccaacagagatgaggtgtttgatgaaagagcagcaaactttgaaaaccatgctgctaaa
ctgggagctacagcagaaaaagcagctgcagttggaactgccaataaaactactgtggag
ggcattcaggcaacagtgaaatcggcaagggagctcaccccacaggtagtatcagcagct
cgtatcctcctgagaaatcctggaaatcaagctgcttatgaacattttgagaccatgaaa
aaccaatggattgataatgtagaaaaaatgacagggttggtggatgaagccattgacact
aaatctctgttggatgcatcagaagaggccattaagaaggacctggataaatgtaaagtt
gcaatggccaacatgcagcctcagatgctggtagctggtgccaccagcattgcccgacga
gcaaaccgcatcctgctggtcgcaaaacgggaagtggaaaattctgaagaccctaaattt
cgggaggctgttaaagcagcctctgatgagctgagcaaaactatatcacccatggtaatg
gatgctaaagctgtggcaggcaacatttctgatcctggtttgcagaagggtttcttggat
tctggatacaaaattctaggagctgtggccaaagtcagagaagccttccagcctcaggaa
ccagattttcctcctcctcctcctgaccttgagcaccttcatctgactgatgagctcgct
cctccaaaaccaccactgccagagggggaggttcccccacccagaccaccaccacctgaa
gaaaaggatgaagagttcccagagcagaaggcaggagaagcaatcaatcagcccatgatg
atggctgctagacagttgcatgatgaagcccggaaatggtctagcaagggcaacgacatc
atcgcggcggcgaagcgcatggcgctgctcatggccgagatgtcgcgcctggtcagaggc
ggcagcggcaacaagcgcgccctcatccagtgcgccaaggacatcgccaaggcgtccgac
gaggtcacgcgcctcgccaaggaggtggcgaagcagtgcacggacaagcgcatcagaacg
aacctcctgcaggtctgtgagcgaatcccaaccatcagtacacagctgaaaattctctcc
actgtcaaagctaccatgctgggcagaactaatatcagtgatgaagagtcggaacaggca
actgagatgttggttcataatgcccagaatctcatgcagtctgtgaaggaaactgtaaga
gaagctgaagcagcatccattaagataagaacagatgctggattcactcttcgctgggtc
agaaagaccccgtggtatcagtaa
DBGET
integrated database retrieval system
