Hirundo rustica (Barn swallow): 120755595
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Entry
120755595 CDS
T09369
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04010
MAPK signaling pathway
hrt04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120755595 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
120755595 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120755595 (NFKB2)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120755595 (NFKB2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
120755595
NCBI-ProteinID:
XP_039926678
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All DBs
Position
8:16678799..16689902
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AA seq
933 aa
AA seq
DB search
MLGLDGLLRPASSSPAGGRPRADMDEQFPPCLDGIDYDDFSFGSHMMEQKEPLMETVEGP
YLVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYTGMARIEVDLVTH
SDPPRVHAHSLVGKQCNEAGNCVTIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQQK
MRNGSRVLTEVELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDPIH
DSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSP
TDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQFTYYPVVEDKEEVERK
RKKVLPQFPQHFGGGSHMGGAGGGAGGFGSGGGGNLSFPYSPGLTYNSIYSPGPHPVGSY
QGGVQMKGPEAEGPGSDRKAPAEESTYCKELQKHAQLCQLWMLALARRNAHALLDYSVTA
DPRMLLAVQRHLAASQDENGDTPLHLAIIHEQTAVIKQLIDVIVSIPSQQIINISNNLQQ
TPLHLAVITKQPQVVQLLLQARADPTLLDRYGNSLLHLALQAGDEEMLRTLLAHLGSAAP
YLLRLPNFHGLLPVHLAVKAKSLACLDLLVRTGADVNAVERQSGRTPLHLAVEMENLNMA
THLVKKLGADINSRTFAGNTPLHLAAGLGSPTLTKLLLKAGADVLCENDEPMSLSSSEAS
SDTDTDPEEQELAMDLGEPALAAEHSTNSKLSTQGHWQAGHRQRRCHTSLDLTRSQKVRE
ILLQASQQGPEAELPTAPQPGKVLSLDSEALQGLEQLLNQDCSGSDWIELAKRLGLCSLV
ETYKDTPSPSVSLLRSYELAGGSLGGLLEALDSMGLHNAVRMLHKTEALEKLQSTELKED
SAYGSESVEEEQAPTLALKPGGELPPSQQPQVH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgctggggctggacgggttgctgagaccagcctcttcctccccggccggcggccggccc
cgcgccgacatggacgagcagttcccaccctgcctggatgggattgactatgatgacttc
agttttggctcccacatgatggagcagaaggagcccctgatggaaacagtggaaggtccc
tacctcgtcattatcgagcagccaaagcagcggggtttccgattccggtacggctgtgag
ggtccttcccacggggggctgccgggggcatccagtgagaaggggcgcaagacctatccc
actgtcaagatctgtaactacacagggatggcccggatcgaggtagacctggtgacgcac
agcgaccctccccgtgtacatgcccacagcctggtgggcaagcagtgcaatgaggctggc
aactgtgtcacaatcgtggggcccaaggacatgactgctcagttcagcaatctgggtgtg
ctccacgtcaccaagaagaatatgatggagatcatgaaggaaaagctgaagcagcagaag
atgcgcaacgggagccgtgtgctgacggaagtggagctgcgtgagatcgagctggaggcg
aaggagctgaagaaggtgatggacctgagcattgtgcgcttgcgcttcaccgcctacctc
cgcgacagcagcgggaacttcacgctggccctccagcctgtcatctcagaccccatccac
gacagcaagtcccccggagcttccaacctgaagatctcacggatggataagacagcaggc
tccgtgcggggtggagatgaagtctacttgctgtgtgataaagttcagaaagatgacatt
gaggtgcgtttctacgaggatgatgagaatggctggcaggcctttggggacttttctcct
acagatgtgcacaagcagtatgccattgtcttccgcacacccccctaccacaagcccaag
atcgaccgtcctgtcaccgtcttcctgcagctgaagcggaaacggggaggggatgtgagt
gactccaagcagttcacctactacccggtggtggaagataaggaagaggtggagaggaag
cgcaagaaagtcctgcctcagtttcctcagcactttggcggtggctcgcacatggggggg
gccggcgggggggccgggggctttggctctggaggaggtgggaacctcagcttcccgtac
tcccctgggctgacctacaacagcatctactcgcctggcccccacccagtggggagctac
caggggggagtgcagatgaagggccccgaggcagaggggcctgggagcgacaggaaggca
cctgcagaagagagcacctactgcaaggagctgcagaagcacgcccagctgtgccagctg
tggatgctggctctagcccgtcgcaatgcccatgccctgctcgactactctgtcaccgcc
gacccccgcatgctgctggcagtccagaggcacctggccgcgtcacaggatgagaacgga
gacacgcctttgcacctcgctattatccatgaacagacggctgtcatcaagcagctgatc
gacgtcattgttagcatccccagccagcagatcatcaacatctccaataacctgcaacag
acaccactgcatctggcagtcatcaccaagcagccccaagtggtccagctcctgctgcaa
gcccgcgccgacccgaccttgctggaccgctacggcaattccctgctgcacctggcactc
caggctggcgatgaagagatgctgaggacgctgctggctcacctgggctcagctgcccct
tacctgctccgcctgcccaatttccatggcctcctgcctgtgcatttggctgtgaaggca
aagagtttggcttgcctggacctgcttgtcaggacgggagcagatgtgaatgcagtggag
aggcaaagtgggaggaccccactgcacctggctgtggagatggagaacctgaacatggcc
acccacctggtgaagaagctgggagcagacatcaacagccggactttcgccgggaacacc
cccctgcacttggctgctggcctgggctcccccaccctcaccaaactgctccttaaagct
ggggcagacgttttgtgtgagaacgatgagcccatgagcctgtcctcatcagaggccagt
agtgacacagacaccgaccctgaggagcaggagctggccatggatctgggggagccagcc
ctggctgcagagcacagtaccaactccaagctctccacacaggggcactggcaggcaggg
cacaggcagcgccgctgccacacgtccctggacctgactcggagccagaaggtgcgggag
atcctgctgcaggcctcccagcaggggcctgaggcagaactgcccactgccccccagcca
ggtaaggtcctgtcactggacagtgaggcactgcaggggctggagcagctgctgaaccag
gactgcagtgggtcagactggatcgagctggccaaacgcctggggctgtgcagcctcgtg
gagacctacaaggacacgccctcacccagcgtcagcctcctgcgcagttacgagctggca
ggtggcagcctggggggactgctggaggcactggactccatggggctccacaacgctgtg
aggatgctccacaaaacggaggcactggagaagctgcaaagcacagagctgaaggaagac
agtgcctacggcagtgagtcggtggaggaggagcaggcgcccacattagccctgaagcca
gggggtgagctgcctcccagccagcagccacaggtgcactga
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