Hirundo rustica (Barn swallow): 120755604
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Entry
120755604 CDS
T09369
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04114
Oocyte meiosis
hrt04120
Ubiquitin mediated proteolysis
hrt04218
Cellular senescence
hrt04310
Wnt signaling pathway
hrt04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120755604 (BTRC)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120755604 (BTRC)
04340 Hedgehog signaling pathway
120755604 (BTRC)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
120755604 (BTRC)
04218 Cellular senescence
120755604 (BTRC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120755604 (BTRC)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120755604 (BTRC)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120755604 (BTRC)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120755604 (BTRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_IFT122_1st
F-box
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR11_2nd
Beta-prop_VPS8
Beta-prop_Nup120_160
F-box_5
DUF4508
Motif
Other DBs
NCBI-GeneID:
120755604
NCBI-ProteinID:
XP_039926716
LinkDB
All DBs
Position
8:complement(22798471..22918549)
Genome browser
AA seq
628 aa
AA seq
DB search
MDPAEAVLQEKALKFMPRIHMPKDGFQLISSGYQAWLKQCSMPRSLWLGCSSLADSMPSL
RCLYNPGTGALPAFQNSSEREDCNNDEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLGS
TAMKTENCVAKTKLANGTSSMIVPKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLI
SQMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYR
VTSDGMLWKKLIERMVRTDSLWRGLSERRGWGQYLFKNKPPDGTAPPNSFYRALYPKIIQ
DIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKR
ILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMV
TCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE
FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK
RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTI
LIWDFLNDPAAQAESTRSPSRTYTYISR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggacccggctgaggccgtcctgcaggagaaggcgctcaagtttatgcctcgaatacac
atgccaaaagatggatttcagcttatatcttctggataccaagcatggctaaagcagtgc
tctatgcccagatctctgtggctgggctgctccagcctggcggacagcatgccctcactg
cgatgcctgtataacccagggactggcgcactcccagctttccagaactcctctgagaga
gaagactgtaataatgatgagccccctaggaagatcattcctgagaagaattcacttaga
cagacctacaacagctgtgccagactgtgcttaaaccaggaaacagtatgtctaggaagc
acggctatgaagactgaaaattgtgtggccaaaacaaaacttgccaatggcacttccagt
atgattgtgcccaagcaaagaaaactgtctgcaagctatgagaaggagaaggagctctgc
gtcaagtactttgaacagtggtccgagtctgaccaggtggagtttgtggagcacctcatc
tcccagatgtgccactaccagcacggacacataaactcatacctcaaacccatgttacag
cgggacttcatcactgcactgccagctcggggattggatcacattgctgagaacattctg
tcatacctggatgccaaatctttgtgtgctgctgagctggtgtgcaaggagtggtaccgg
gtgacgtcagatgggatgctgtggaagaaactcattgagagaatggtcaggacagactcc
ttgtggaggggtttgtcagagaggagaggatgggggcaatatctatttaaaaataaacct
cctgatggaactgcaccacccaactccttctacagagcactttaccccaaaataatacag
gacatagagacaatagagtcgaactggcggtgtggaaggcacagtttacagaggatccac
tgccgaagtgagacgagcaaaggggtttattgtttacagtatgatgatcagaagatagta
agcggcctacgagacaatactattaagatctgggataagaataccttggaatgcaagcga
attctcaccggacacacgggttctgtcctgtgcctccagtatgacgaacgggtgatcatt
actggatcttcagactcaacagtcagggtgtgggacgtgaacgcgggcgagatgctgaac
acgctgatccaccactgcgaagccgtgctgcacctccgcttcaacaacggcatgatggtg
acgtgttccaaggaccgctccatcgccgtgtgggacatggcctccccgacagacatcacc
ctgaggagggtgctcgtagggcaccgagctgccgtcaatgtggtggacttcgatgacaag
tacattgtatcggcatcaggtgacagaactataaaggtatggaacactagtacctgcgaa
tttgtgcgcaccttaaatggccacaaacgaggcattgcatgtctgcagtacagagacagg
ctagtagtgagcggctcttcagataataccatcaggctgtgggatatcgagtgtggggcg
tgtttacgagtactggaaggccatgaagagttggtgagatgcatacgctttgataacaag
aggatagtcagtggggcatacgatgggaaaattaaagtatgggatcttgtggctgctttg
gatcctcgtgctccagcagggaccctctgcttgcgaacccttgtggagcattctggaaga
gtctttcgacttcagtttgatgagttccagatcgtcagcagctcacatgatgacaccatc
ctcatctgggattttctgaatgacccagctgcccaggcagaatccactcgctccccgtcc
agaacatacacctacatctccagataa
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